12 homologs were found in PanDaTox collection
for query gene TDE0431 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE0431  LysM domain-containing protein  100 
 
 
374 aa  750    Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00107019  n/a   
 
 
-
 
NC_012560  Avin_38690  lipoprotein NlpD  25.83 
 
 
284 aa  57  0.0000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2795  Peptidoglycan-binding lysin domain protein  52 
 
 
233 aa  47.8  0.0003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.683971  normal  0.0904413 
 
 
-
 
NC_013093  Amir_5276  Transglycosylase domain protein  41.67 
 
 
205 aa  47  0.0005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11314  hypothetical protein  31.87 
 
 
456 aa  46.6  0.0007  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2152  Peptidoglycan-binding LysM  50.85 
 
 
334 aa  46.6  0.0007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0492  alginate lyase 2  37.21 
 
 
1556 aa  45.1  0.002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10980  peptidase M23B  58 
 
 
274 aa  45.1  0.002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000310987  n/a   
 
 
-
 
NC_010001  Cphy_0789  peptidoglycan-binding LysM  46.15 
 
 
285 aa  44.3  0.003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04252  LysM domain protein  34.25 
 
 
424 aa  44.3  0.003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1548  peptidoglycan-binding LysM  34.17 
 
 
1051 aa  43.5  0.006  Nocardioides sp. JS614  Bacteria  normal  0.637066  n/a   
 
 
-
 
NC_011071  Smal_3686  Peptidoglycan-binding LysM  41.51 
 
 
97 aa  42.7  0.01  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
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