More than 300 homologs were found in PanDaTox collection
for query gene TDE0305 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE0305  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
368 aa  752    Treponema denticola ATCC 35405  Bacteria  normal  0.0911742  n/a   
 
 
-
 
NC_007517  Gmet_2845  GTP-dependent nucleic acid-binding protein EngD  58.42 
 
 
364 aa  441  1e-123  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000149199  hitchhiker  0.000000000000211408 
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  59.19 
 
 
364 aa  438  9.999999999999999e-123  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
NC_009253  Dred_1280  GTP-binding protein YchF  60.11 
 
 
367 aa  439  9.999999999999999e-123  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2581  GTP-dependent nucleic acid-binding protein EngD  58.97 
 
 
364 aa  441  9.999999999999999e-123  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  58.97 
 
 
364 aa  441  9.999999999999999e-123  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  59.19 
 
 
364 aa  438  9.999999999999999e-123  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  58.97 
 
 
364 aa  441  9.999999999999999e-123  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  57.61 
 
 
364 aa  435  1e-121  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  57.88 
 
 
364 aa  436  1e-121  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  57.61 
 
 
364 aa  435  1e-121  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  57.88 
 
 
364 aa  436  1e-121  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  57.88 
 
 
364 aa  436  1e-121  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  57.61 
 
 
364 aa  434  1e-121  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  57.88 
 
 
364 aa  436  1e-121  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0450  GTP-dependent nucleic acid-binding protein EngD  58.65 
 
 
364 aa  436  1e-121  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2592  GTP-dependent nucleic acid-binding protein EngD  58.81 
 
 
364 aa  436  1e-121  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000145967  n/a   
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  58.15 
 
 
364 aa  436  1e-121  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  57.88 
 
 
364 aa  436  1e-121  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_008609  Ppro_0746  GTP-dependent nucleic acid-binding protein EngD  57.34 
 
 
364 aa  434  1e-120  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0310591  n/a   
 
 
-
 
NC_010622  Bphy_2708  GTP-dependent nucleic acid-binding protein EngD  58.38 
 
 
364 aa  434  1e-120  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  57.34 
 
 
363 aa  432  1e-120  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3611  GTP-dependent nucleic acid-binding protein EngD  57.34 
 
 
364 aa  432  1e-120  Burkholderia sp. 383  Bacteria  normal  normal  0.850292 
 
 
-
 
NC_013162  Coch_0099  GTP-dependent nucleic acid-binding protein EngD  56.01 
 
 
363 aa  432  1e-120  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.76867  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  57.61 
 
 
363 aa  434  1e-120  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_010681  Bphyt_3507  GTP-dependent nucleic acid-binding protein EngD  58.38 
 
 
364 aa  431  1e-120  Burkholderia phytofirmans PsJN  Bacteria  normal  0.125034  normal  0.0137315 
 
 
-
 
NC_002939  GSU0664  GTP-dependent nucleic acid-binding protein EngD  57.07 
 
 
364 aa  430  1e-119  Geobacter sulfurreducens PCA  Bacteria  normal  0.151468  n/a   
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
364 aa  430  1e-119  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  431  1e-119  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1171  GTP-binding protein YchF  58.42 
 
 
364 aa  428  1e-119  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0048  GTP-dependent nucleic acid-binding protein EngD  54.2 
 
 
367 aa  427  1e-118  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc2898  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
364 aa  426  1e-118  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  426  1e-118  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011083  SeHA_C1981  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  425  1e-118  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.262835  normal 
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  424  1e-118  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  424  1e-118  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  56.91 
 
 
364 aa  426  1e-118  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  57.34 
 
 
364 aa  427  1e-118  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_012912  Dd1591_2063  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  426  1e-118  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  58.2 
 
 
361 aa  427  1e-118  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_011205  SeD_A1537  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  425  1e-118  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0518912 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  427  1e-118  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_011149  SeAg_B1353  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  425  1e-118  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0280261  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  56.25 
 
 
363 aa  424  1e-118  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1923  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  425  1e-118  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  56.25 
 
 
364 aa  426  1e-118  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_011080  SNSL254_A1917  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  425  1e-118  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.188872  normal 
 
 
-
 
CP001637  EcDH1_2444  GTP-binding protein YchF  56.64 
 
 
363 aa  422  1e-117  Escherichia coli DH1  Bacteria  normal  0.0781916  n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  422  1e-117  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0027  GTP-binding protein YchF  55.95 
 
 
366 aa  421  1e-117  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  58.15 
 
 
363 aa  422  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_009801  EcE24377A_1350  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Escherichia coli E24377A  Bacteria  normal  0.0630481  n/a   
 
 
-
 
NC_013205  Aaci_2931  GTP-binding protein YchF  55.68 
 
 
366 aa  422  1e-117  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1684  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000467912  normal  0.464774 
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  56.06 
 
 
366 aa  422  1e-117  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_012880  Dd703_1849  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  423  1e-117  Dickeya dadantii Ech703  Bacteria  normal  0.476561  n/a   
 
 
-
 
NC_010717  PXO_04539  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  422  1e-117  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.910533  n/a   
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  55.98 
 
 
364 aa  424  1e-117  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_012856  Rpic12D_2774  GTP-dependent nucleic acid-binding protein EngD  55.59 
 
 
363 aa  424  1e-117  Ralstonia pickettii 12D  Bacteria  normal  normal  0.97205 
 
 
-
 
NC_010468  EcolC_2423  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0847638 
 
 
-
 
NC_011146  Gbem_2765  GTP-dependent nucleic acid-binding protein EngD  56.1 
 
 
364 aa  423  1e-117  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  56.52 
 
 
363 aa  422  1e-117  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  56.25 
 
 
363 aa  422  1e-117  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000000959871  n/a   
 
 
-
 
NC_012918  GM21_1475  GTP-dependent nucleic acid-binding protein EngD  56.1 
 
 
364 aa  422  1e-117  Geobacter sp. M21  Bacteria  n/a    normal  0.0116591 
 
 
-
 
NC_008228  Patl_2571  GTP-dependent nucleic acid-binding protein EngD  55.43 
 
 
363 aa  422  1e-117  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1939  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Escherichia coli SMS-3-5  Bacteria  normal  0.256808  normal  0.0918473 
 
 
-
 
NC_009656  PSPA7_5323  GTP-dependent nucleic acid-binding protein EngD  56.76 
 
 
366 aa  423  1e-117  Pseudomonas aeruginosa PA7  Bacteria  normal  0.207284  n/a   
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  55.98 
 
 
363 aa  422  1e-117  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000208433  normal  0.179939 
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  55.98 
 
 
363 aa  422  1e-117  Shewanella sp. MR-7  Bacteria  unclonable  0.00000596539  normal  0.137935 
 
 
-
 
NC_008463  PA14_61820  GTP-dependent nucleic acid-binding protein EngD  56.49 
 
 
366 aa  422  1e-117  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000490412  hitchhiker  0.00796401 
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  55.14 
 
 
366 aa  424  1e-117  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009800  EcHS_A1308  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Escherichia coli HS  Bacteria  normal  0.253077  n/a   
 
 
-
 
NC_008532  STER_0005  GTP-dependent nucleic acid-binding protein EngD  54.79 
 
 
371 aa  421  1e-117  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  55.98 
 
 
363 aa  422  1e-117  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_010658  SbBS512_E1367  GTP-dependent nucleic acid-binding protein EngD  56.64 
 
 
363 aa  422  1e-117  Shigella boydii CDC 3083-94  Bacteria  normal  0.37474  n/a   
 
 
-
 
CP001509  ECD_01178  translation-associated GTPase  56.37 
 
 
363 aa  420  1e-116  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0719  GTP-dependent nucleic acid-binding protein EngD  55.95 
 
 
366 aa  419  1e-116  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4464  GTP-dependent nucleic acid-binding protein EngD  55.95 
 
 
366 aa  420  1e-116  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_010322  PputGB1_0763  GTP-dependent nucleic acid-binding protein EngD  56.22 
 
 
366 aa  421  1e-116  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0006  GTP-dependent nucleic acid-binding protein EngD  54.01 
 
 
371 aa  419  1e-116  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  56.37 
 
 
387 aa  418  1e-116  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_009441  Fjoh_2467  GTP-dependent nucleic acid-binding protein EngD  56.25 
 
 
364 aa  419  1e-116  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293996  n/a   
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  55.43 
 
 
364 aa  419  1e-116  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  55.41 
 
 
366 aa  419  1e-116  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
366 aa  419  1e-116  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_010159  YpAngola_A2468  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  419  1e-116  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2075  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  419  1e-116  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0577109  n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  55.8 
 
 
366 aa  420  1e-116  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_012892  B21_01188  hypothetical protein  56.37 
 
 
363 aa  420  1e-116  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0986  GTP-binding protein YchF  55.98 
 
 
363 aa  418  1e-116  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1982  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  419  1e-116  Serratia proteamaculans 568  Bacteria  normal  normal  0.0132051 
 
 
-
 
NC_010465  YPK_2187  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  419  1e-116  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0729  GTP-dependent nucleic acid-binding protein EngD  56.79 
 
 
363 aa  418  1e-116  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195825 
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  55.43 
 
 
364 aa  419  1e-116  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
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