206 homologs were found in PanDaTox collection
for query gene Syncc9902_1373 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_1373  cell envelope-like transcriptional attenuator  100 
 
 
319 aa  626  1e-178  Synechococcus sp. CC9902  Bacteria  normal  0.125598  n/a   
 
 
-
 
NC_007516  Syncc9605_1612  cell envelope-related function transcriptional attenuator  57 
 
 
310 aa  350  3e-95  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0634427 
 
 
-
 
NC_008820  P9303_09781  LytR-membrane bound transcriptional regulator  48.22 
 
 
336 aa  283  2.0000000000000002e-75  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  34.57 
 
 
492 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  34.04 
 
 
436 aa  110  4.0000000000000004e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  34.2 
 
 
492 aa  109  7.000000000000001e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.15 
 
 
319 aa  105  1e-21  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  34.58 
 
 
502 aa  99.8  6e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  31.63 
 
 
456 aa  97.8  2e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  33.18 
 
 
501 aa  98.2  2e-19  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  34.12 
 
 
451 aa  97.8  2e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  31.8 
 
 
411 aa  97.1  3e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  27.61 
 
 
471 aa  95.1  1e-18  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  30.66 
 
 
418 aa  95.1  1e-18  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  29.96 
 
 
337 aa  92.4  8e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  31.19 
 
 
445 aa  91.3  2e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  28.32 
 
 
503 aa  90.9  3e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  29.39 
 
 
475 aa  89.4  7e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  31.17 
 
 
377 aa  88.6  1e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  32.21 
 
 
453 aa  85.9  8e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  28.8 
 
 
472 aa  85.1  0.000000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  30.06 
 
 
471 aa  84.7  0.000000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  30.05 
 
 
419 aa  85.1  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  27.96 
 
 
481 aa  84  0.000000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  28.47 
 
 
481 aa  84.3  0.000000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  26.67 
 
 
414 aa  82.4  0.000000000000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  31.4 
 
 
384 aa  82  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  28.46 
 
 
303 aa  80.5  0.00000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  26.48 
 
 
344 aa  80.9  0.00000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  24.61 
 
 
405 aa  79.3  0.00000000000008  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  28.5 
 
 
439 aa  79  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  28.31 
 
 
389 aa  78.6  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  24.49 
 
 
333 aa  76.6  0.0000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  24.49 
 
 
333 aa  76.6  0.0000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  24.49 
 
 
333 aa  76.6  0.0000000000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  24.49 
 
 
335 aa  76.3  0.0000000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  24.49 
 
 
333 aa  76.6  0.0000000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  24.91 
 
 
333 aa  76.3  0.0000000000007  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  28.51 
 
 
329 aa  75.9  0.0000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  23.81 
 
 
333 aa  75.5  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  24.57 
 
 
333 aa  74.7  0.000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  25.78 
 
 
380 aa  74.7  0.000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  25.75 
 
 
298 aa  75.1  0.000000000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  27.88 
 
 
417 aa  73.9  0.000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  22.3 
 
 
317 aa  73.9  0.000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  21.59 
 
 
308 aa  73.6  0.000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  25.86 
 
 
333 aa  73.6  0.000000000004  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  23.81 
 
 
335 aa  73.2  0.000000000005  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  27.37 
 
 
338 aa  72.8  0.000000000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  27.78 
 
 
509 aa  72  0.00000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  24.55 
 
 
403 aa  72  0.00000000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  27.76 
 
 
338 aa  72  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  27.02 
 
 
337 aa  71.2  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  27.37 
 
 
338 aa  71.6  0.00000000002  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  27.37 
 
 
338 aa  71.6  0.00000000002  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  28.98 
 
 
434 aa  71.6  0.00000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  26.94 
 
 
426 aa  70.9  0.00000000003  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  27.57 
 
 
406 aa  70.1  0.00000000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  27.13 
 
 
337 aa  69.3  0.00000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  26.45 
 
 
344 aa  68.6  0.0000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  26.6 
 
 
337 aa  68.9  0.0000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  26.6 
 
 
337 aa  68.9  0.0000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  26.6 
 
 
333 aa  68.6  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  25 
 
 
308 aa  68.6  0.0000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  26.6 
 
 
338 aa  68.6  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  29.55 
 
 
345 aa  68.2  0.0000000002  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  26.24 
 
 
337 aa  67  0.0000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  24.4 
 
 
437 aa  67  0.0000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  28.64 
 
 
345 aa  66.6  0.0000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  25.68 
 
 
345 aa  66.6  0.0000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  28.64 
 
 
345 aa  66.6  0.0000000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  28.64 
 
 
345 aa  66.6  0.0000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  29.55 
 
 
345 aa  66.6  0.0000000005  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  29.55 
 
 
345 aa  66.2  0.0000000006  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  25.86 
 
 
345 aa  66.2  0.0000000007  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  25.86 
 
 
345 aa  66.2  0.0000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  25.66 
 
 
453 aa  65.5  0.000000001  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  23.92 
 
 
437 aa  65.9  0.000000001  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  26.92 
 
 
497 aa  65.9  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  27.62 
 
 
390 aa  65.5  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  29.09 
 
 
345 aa  65.1  0.000000002  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  30.12 
 
 
271 aa  64.7  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  25.44 
 
 
414 aa  64.7  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  27.22 
 
 
311 aa  63.9  0.000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  27.8 
 
 
356 aa  63.5  0.000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  30.52 
 
 
303 aa  63.2  0.000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_008530  LGAS_0174  transcriptional regulator  22.71 
 
 
374 aa  62.8  0.000000008  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.0565386  hitchhiker  0.0000000000000158467 
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  22.66 
 
 
329 aa  62  0.00000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  28.57 
 
 
296 aa  62  0.00000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  26.92 
 
 
314 aa  62  0.00000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  20.97 
 
 
310 aa  62  0.00000001  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  29.8 
 
 
506 aa  62.4  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_010003  Pmob_0905  cell envelope-related transcriptional attenuator  23.08 
 
 
388 aa  62.4  0.00000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1244  cell envelope-related transcriptional attenuator  23.74 
 
 
445 aa  61.2  0.00000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000703915  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  25.49 
 
 
335 aa  61.6  0.00000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  27.72 
 
 
434 aa  61.2  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_014212  Mesil_0754  cell envelope-related transcriptional attenuator  21.49 
 
 
419 aa  60.8  0.00000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0493984  hitchhiker  0.0069249 
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  30.05 
 
 
328 aa  60.1  0.00000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_008025  Dgeo_0132  cell envelope-related transcriptional attenuator  27.68 
 
 
426 aa  59.7  0.00000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.272824  normal 
 
 
-
 
NC_009616  Tmel_1561  cell envelope-related transcriptional attenuator  23.96 
 
 
387 aa  59.7  0.00000007  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
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