53 homologs were found in PanDaTox collection
for query gene Swoo_4002 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_4002  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 		 197 aa  399  9.999999999999999e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.285219 
 
 
-
 
NC_009901  Spea_3325  pyridoxamine 5'-phosphate oxidase-related FMN-binding  84.3 
 
 		 189 aa  300  9e-81  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0502569  n/a   
 
 
-
 
NC_004347  SO_3667  hypothetical protein  76.44 
 
 		 185 aa  280  1e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3233  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  75.86 
 
 		 185 aa  276  1e-73  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0067733  normal  0.916764 
 
 
-
 
NC_009665  Shew185_1023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  76.44 
 
 		 185 aa  276  2e-73  Shewanella baltica OS185  Bacteria  normal  0.208688  n/a   
 
 
-
 
NC_009997  Sbal195_1056  pyridoxamine 5'-phosphate oxidase-related FMN-binding  76.44 
 
 		 185 aa  275  2e-73  Shewanella baltica OS195  Bacteria  normal  0.957646  normal  1 
 
 
-
 
NC_011663  Sbal223_3336  pyridoxamine 5'-phosphate oxidase-related FMN-binding  76.44 
 
 		 185 aa  276  2e-73  Shewanella baltica OS223  Bacteria  normal  0.195481  normal  1 
 
 
-
 
NC_009438  Sputcn32_0968  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  74.14 
 
 		 185 aa  273  1.0000000000000001e-72  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0954  pyridoxamine 5'-phosphate oxidase-related FMN-binding  75.86 
 
 		 185 aa  272  2.0000000000000002e-72  Shewanella baltica OS155  Bacteria  normal  0.0302738  n/a   
 
 
-
 
NC_007954  Sden_0792  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  63.53 
 
 		 176 aa  232  3e-60  Shewanella denitrificans OS217  Bacteria  normal  0.0127904  n/a   
 
 
-
 
NC_009456  VC0395_0330  heme-binding protein HutZ  51.76 
 
 		 176 aa  189  2e-47  Vibrio cholerae O395  Bacteria  normal  0.0843987  n/a   
 
 
-
 
NC_011312  VSAL_I1748  heme uptake and utilization protein HuvZ  52.12 
 
 		 176 aa  183  1.0000000000000001e-45  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_013457  VEA_001358  pyridoxamine 5'-phosphate oxidase-related putative heme iron utilization protein  50 
 
 		 176 aa  180  1e-44  Vibrio sp. Ex25  Bacteria  normal  0.343115  n/a   
 
 
-
 
NC_009784  VIBHAR_05247  hypothetical protein  49.41 
 
 		 176 aa  178  5.999999999999999e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_0722  heme binding protein  40.96 
 
 		 173 aa  151  7e-36  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.67 
 
 		 165 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.448208  normal  1 
 
 
-
 
NC_007520  Tcr_0178  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.85 
 
 		 173 aa  114  1.0000000000000001e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0671  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  32.67 
 
 		 167 aa  95.9  4e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_0786  heme-utilization protein HutZ, putative  36 
 
 		 173 aa  92.4  3e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0929  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36 
 
 		 174 aa  92.4  4e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_0587  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.72 
 
 		 252 aa  90.9  1e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_012039  Cla_0339  conserved hypothetical protein, pyridoxamine 5'-phosphate oxidase family  35.37 
 
 		 168 aa  90.1  2e-17  Campylobacter lari RM2100  Bacteria  normal  0.988244  n/a   
 
 
-
 
NC_008599  CFF8240_1758  pyridoxamine 5'-phosphate oxidase family protein  38.17 
 
 		 248 aa  85.1  6e-16  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_003912  CJE1785  hypothetical protein  34.97 
 
 		 251 aa  84  0.000000000000001  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_008787  CJJ81176_1600  hypothetical protein  34.97 
 
 		 251 aa  84.3  0.000000000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1967  hypothetical protein  35.33 
 
 		 247 aa  82.8  0.000000000000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_0652  pyridoxamine 5'-phosphate oxidase family protein  30.86 
 
 		 283 aa  71.2  0.000000000008  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00637649  n/a   
 
 
-
 
NC_009523  RoseRS_2721  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.82 
 
 		 171 aa  63.2  0.000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1064  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.17 
 
 		 171 aa  58.9  0.00000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007908  Rfer_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.33 
 
 		 162 aa  56.6  0.0000003  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.00418233  n/a   
 
 
-
 
NC_008781  Pnap_2042  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.33 
 
 		 199 aa  55.8  0.0000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0340627  normal  1 
 
 
-
 
NC_009512  Pput_4366  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.34 
 
 		 243 aa  53.5  0.000002  Pseudomonas putida F1  Bacteria  normal  0.809108  normal  0.082398 
 
 
-
 
NC_010501  PputW619_0965  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.21 
 
 		 243 aa  53.5  0.000002  Pseudomonas putida W619  Bacteria  normal  0.499992  normal  0.821374 
 
 
-
 
NC_007492  Pfl01_4504  pyridoxamine 5'-phosphate oxidase-like, FMN-binding  31.3 
 
 		 243 aa  51.2  0.00001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  decreased coverage  0.000287779 
 
 
-
 
NC_009767  Rcas_3461  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30 
 
 		 170 aa  50.1  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00895829 
 
 
-
 
NC_008782  Ajs_2312  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.8 
 
 		 166 aa  49.7  0.00003  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.885603 
 
 
-
 
NC_012560  Avin_13440  pyridoxamine 5-phosphate oxidase  31.25 
 
 		 245 aa  49.7  0.00003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_1547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.8 
 
 		 166 aa  49.7  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  0.610229  n/a   
 
 
-
 
NC_008228  Patl_1491  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.82 
 
 		 244 aa  49.3  0.00003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_0688  hypothetical protein  31.06 
 
 		 194 aa  48.1  0.00009  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.365581 
 
 
-
 
NC_011831  Cagg_1695  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.97 
 
 		 167 aa  47.8  0.00009  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_1358  hypothetical protein  30.53 
 
 		 289 aa  47.8  0.0001  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0010611  normal  0.192229 
 
 
-
 
NC_010322  PputGB1_4491  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.06 
 
 		 276 aa  47  0.0002  Pseudomonas putida GB-1  Bacteria  normal  0.0201918  normal  1 
 
 
-
 
NC_010002  Daci_4546  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.78 
 
 		 194 aa  47.4  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  0.158817  normal  0.600286 
 
 
-
 
NC_009439  Pmen_3685  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.1 
 
 		 244 aa  46.6  0.0002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.32 
 
 		 249 aa  43.9  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  31.61 
 
 		 243 aa  43.9  0.002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_4959  hypothetical protein  28.57 
 
 		 244 aa  43.1  0.003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.112474  n/a   
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 		 249 aa  42.4  0.005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.7 
 
 		 247 aa  42.4  0.005  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.547637 
 
 
-
 
NC_008044  TM1040_2264  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.22 
 
 		 171 aa  42  0.006  Ruegeria sp. TM1040  Bacteria  normal  0.159731  normal  1 
 
 
-
 
NC_013739  Cwoe_3456  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  28.89 
 
 		 268 aa  41.6  0.007  Conexibacter woesei DSM 14684  Bacteria  normal  0.0456393  normal  0.068579 
 
 
-
 
NC_008463  PA14_57040  hypothetical protein  26.72 
 
 		 244 aa  41.6  0.008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
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