16 homologs were found in PanDaTox collection
for query gene Swol_2491 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_2491  hypothetical protein  100 
 
 
106 aa  213  5.9999999999999996e-55  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2493  type IIS restriction enzyme  97.03 
 
 
1183 aa  196  6e-50  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2506  type II restriction enzyme  94.83 
 
 
72 aa  109  1.0000000000000001e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2288  type II restriction enzyme  41.58 
 
 
1160 aa  89.4  1e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007949  Bpro_5027  type II restriction enzyme  43.56 
 
 
1180 aa  82.8  0.000000000000001  Polaromonas sp. JS666  Bacteria  normal  0.776061  normal 
 
 
-
 
NC_011662  Tmz1t_0295  type II restriction enzyme  41.58 
 
 
1167 aa  81.3  0.000000000000005  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0339  putative restriction enzyme  43.14 
 
 
1205 aa  80.5  0.000000000000007  Escherichia coli HS  Bacteria  hitchhiker  0.00710778  n/a   
 
 
-
 
NC_010831  Cphamn1_1677  hypothetical protein  40.78 
 
 
1171 aa  79.3  0.00000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00114545 
 
 
-
 
NC_012793  GWCH70_1299  Eco57I restriction endonuclease  41.18 
 
 
1144 aa  74.3  0.0000000000005  Geobacillus sp. WCH70  Bacteria  normal  0.0387167  n/a   
 
 
-
 
NC_008740  Maqu_0561  hypothetical protein  40.38 
 
 
1162 aa  70.1  0.00000000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1608  hypothetical protein  39.81 
 
 
1182 aa  68.9  0.00000000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.102768 
 
 
-
 
NC_009429  Rsph17025_3731  hypothetical protein  35.92 
 
 
1174 aa  67  0.00000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2207  hypothetical protein  38.83 
 
 
332 aa  66.6  0.00000000009  Cyanothece sp. PCC 8802  Bacteria  decreased coverage  0.000153099  normal 
 
 
-
 
NC_013165  Shel_02930  hypothetical protein  38.83 
 
 
1131 aa  59.7  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.264298  normal 
 
 
-
 
NC_013165  Shel_02940  hypothetical protein  38.83 
 
 
1140 aa  59.7  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.45552  normal 
 
 
-
 
NC_013730  Slin_4847  putative restriction enzyme  35.64 
 
 
1219 aa  50.4  0.000007  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.0000521229  normal  0.767237 
 
 
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