11 homologs were found in PanDaTox collection
for query gene Swit_2520 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_2520  hypothetical protein  100 
 
 		 118 aa  239  7e-63  Sphingomonas wittichii RW1  Bacteria  normal  0.219505  normal  1 
 
 
-
 
NC_007413  Ava_4985  steroid delta-5-3-ketosteroid isomerase  23.53 
 
 		 127 aa  50.8  0.000006  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009427  Saro_3765  nuclear transport factor 2  30.51 
 
 		 125 aa  50.8  0.000006  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.581539  n/a   
 
 
-
 
NC_011884  Cyan7425_3259  protein of unknown function DUF1486  28.97 
 
 		 137 aa  49.7  0.00001  Cyanothece sp. PCC 7425  Bacteria  normal  0.0164408  normal  0.250865 
 
 
-
 
NC_011729  PCC7424_2031  putative ketosteroid isomerase  22.94 
 
 		 135 aa  46.6  0.0001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013093  Amir_3010  hypothetical protein  35.64 
 
 		 128 aa  45.1  0.0003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_3295  nuclear transport factor 2  28.57 
 
 		 122 aa  42.7  0.002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.168461 
 
 
-
 
NC_010505  Mrad2831_5286  hypothetical protein  25.83 
 
 		 137 aa  42.7  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1710  hypothetical protein  32.17 
 
 		 142 aa  41.6  0.003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.518536  normal  0.0462427 
 
 
-
 
NC_007488  RSP_4013  hypothetical protein  32.08 
 
 		 131 aa  41.6  0.004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.772114  n/a   
 
 
-
 
NC_009427  Saro_3596  nuclear transport factor 2  29.73 
 
 		 128 aa  40.4  0.009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.442215  n/a   
 
 
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