8 homologs were found in PanDaTox collection
for query gene Swit_0197 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_0197  hypothetical protein  100 
 
 
1414 aa  2858    Sphingomonas wittichii RW1  Bacteria  normal  0.356041  normal 
 
 
-
 
NC_009720  Xaut_2990  putative ATPase  71.99 
 
 
1406 aa  2055    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.12243 
 
 
-
 
NC_013440  Hoch_5788  transglutaminase domain protein  28.8 
 
 
2543 aa  73.6  0.00000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0634  superfamily I DNA/RNA helicase  24.93 
 
 
1584 aa  69.7  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2613  hypothetical protein  25.4 
 
 
412 aa  67  0.000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.382346 
 
 
-
 
NC_008321  Shewmr4_3209  putative transcriptional regulator  23.43 
 
 
1687 aa  59.7  0.0000004  Shewanella sp. MR-4  Bacteria  normal  unclonable  0.000000000587168 
 
 
-
 
NC_013216  Dtox_1537  putative transcriptional regulator  32.35 
 
 
1672 aa  56.6  0.000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  unclonable  0.00000000286892 
 
 
-
 
NC_009051  Memar_1474  hypothetical protein  23.62 
 
 
1625 aa  52.4  0.00006  Methanoculleus marisnigri JR1  Archaea  normal  0.109086  n/a   
 
 
-
 
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