More than 300 homologs were found in PanDaTox collection
for query gene Svir_37850 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_37850  response regulator of citrate/malate metabolism  100 
 
 
227 aa  453  1.0000000000000001e-126  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.277898 
 
 
-
 
NC_013595  Sros_8064  response regulator of citrate/malate metabolism  51.98 
 
 
224 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0598  response regulator receiver and unknown domain protein  51.56 
 
 
223 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00972259 
 
 
-
 
NC_008541  Arth_1397  response regulator receiver/unknown domain-containing protein  48.48 
 
 
228 aa  197  1.0000000000000001e-49  Arthrobacter sp. FB24  Bacteria  normal  0.362742  n/a   
 
 
-
 
NC_013757  Gobs_3623  response regulator receiver and unknown domain protein  51.95 
 
 
232 aa  195  4.0000000000000005e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.796239  n/a   
 
 
-
 
NC_009077  Mjls_3250  response regulator receiver/unknown domain-containing protein  49.78 
 
 
220 aa  191  1e-47  Mycobacterium sp. JLS  Bacteria  normal  0.237703  normal 
 
 
-
 
NC_009338  Mflv_3002  response regulator receiver/unknown domain-containing protein  50 
 
 
221 aa  190  1e-47  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0266393 
 
 
-
 
NC_008146  Mmcs_3239  response regulator receiver/unknown domain-containing protein  50 
 
 
220 aa  190  2e-47  Mycobacterium sp. MCS  Bacteria  normal  0.926137  n/a   
 
 
-
 
NC_008705  Mkms_3301  response regulator receiver/unknown domain-containing protein  50 
 
 
220 aa  190  2e-47  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0147948 
 
 
-
 
NC_013131  Caci_5599  response regulator receiver and unknown domain protein  45.06 
 
 
243 aa  189  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0782544  normal  0.532525 
 
 
-
 
NC_008726  Mvan_3504  response regulator receiver/unknown domain-containing protein  48.03 
 
 
221 aa  186  2e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0894605 
 
 
-
 
NC_013235  Namu_1040  response regulator receiver and unknown domain protein  48.44 
 
 
228 aa  186  2e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0064  response regulator receiver and unknown domain protein  47.19 
 
 
238 aa  183  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.803731  normal 
 
 
-
 
NC_013159  Svir_25720  response regulator of citrate/malate metabolism  45.33 
 
 
231 aa  173  1.9999999999999998e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0508  response regulator receiver and unknown domain protein  44.64 
 
 
224 aa  173  1.9999999999999998e-42  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.957096  n/a   
 
 
-
 
NC_012793  GWCH70_0514  response regulator receiver and unknown domain protein  36.52 
 
 
227 aa  162  4.0000000000000004e-39  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8199  response regulator receiver and unknown domain protein  42.61 
 
 
226 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5078  response regulator receiver and unknown domain protein  47.42 
 
 
228 aa  160  1e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.763511 
 
 
-
 
NC_013093  Amir_3706  response regulator receiver and unknown domain protein  43.86 
 
 
226 aa  160  1e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1163  response regulator receiver and unknown domain protein  42.73 
 
 
231 aa  157  2e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2259  response regulator receiver and unknown domain protein  43.61 
 
 
223 aa  156  2e-37  Geodermatophilus obscurus DSM 43160  Bacteria  hitchhiker  0.00555688  n/a   
 
 
-
 
NC_013411  GYMC61_1376  response regulator receiver and unknown domain protein  38.86 
 
 
226 aa  156  3e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0517  two component transcriptional regulator, Fis family  43.67 
 
 
231 aa  155  7e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.169907  normal  0.0442424 
 
 
-
 
NC_011830  Dhaf_4644  response regulator receiver and unknown domain protein  36.52 
 
 
231 aa  153  2e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0210142  n/a   
 
 
-
 
NC_008541  Arth_1528  response regulator receiver/unknown domain-containing protein  38.3 
 
 
236 aa  151  1e-35  Arthrobacter sp. FB24  Bacteria  normal  0.827563  n/a   
 
 
-
 
NC_013595  Sros_3868  putative response regulator ofcitrate/malate metabolism  41.07 
 
 
223 aa  149  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0941559  normal  0.017891 
 
 
-
 
NC_013411  GYMC61_2788  response regulator receiver and unknown domain protein  34.07 
 
 
230 aa  147  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_1528  response regulator receiver and unknown domain protein  37.45 
 
 
237 aa  145  4.0000000000000006e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000318963 
 
 
-
 
NC_014165  Tbis_1769  response regulator receiver and unknown domain-containing protein  46.46 
 
 
223 aa  141  7e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.870814  normal 
 
 
-
 
NC_010184  BcerKBAB4_0473  response regulator receiver  32.74 
 
 
230 aa  137  1e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4415  response regulator receiver/unknown domain-containing protein  37.61 
 
 
241 aa  137  1e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003320  transcriptional regulatory protein CitB  37.18 
 
 
228 aa  137  2e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1303  response regulator receiver/unknown domain-containing protein  37.83 
 
 
220 aa  137  2e-31  Arthrobacter sp. FB24  Bacteria  normal  0.0321774  n/a   
 
 
-
 
NC_011886  Achl_1346  response regulator receiver and unknown domain protein  37.83 
 
 
220 aa  137  2e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000000367941 
 
 
-
 
NC_011312  VSAL_I2186  HTH-type transcriptional regulator, two-component response regulator  36.32 
 
 
224 aa  134  1.9999999999999998e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1864  response regulator receiver/unknown domain-containing protein  34.93 
 
 
230 aa  132  5e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.134891  normal  0.12527 
 
 
-
 
NC_009457  VC0395_A0317  transcriptional regulator CitB  34.06 
 
 
230 aa  132  6e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0689  response regulator  32.74 
 
 
230 aa  132  6e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02430  response regulator  35.62 
 
 
228 aa  132  6e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0615  response regulator  32 
 
 
235 aa  131  9e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0621  DNA-binding response regulator  32.74 
 
 
230 aa  131  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0546  response regulator  32.74 
 
 
235 aa  131  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000213708  n/a   
 
 
-
 
NC_005957  BT9727_0471  response regulator  32.74 
 
 
230 aa  130  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2968  response regulator receiver and unknown domain protein  38.77 
 
 
228 aa  130  1.0000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.33413  n/a   
 
 
-
 
NC_005957  BT9727_0488  response regulator  31.56 
 
 
235 aa  130  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4724  response regulator  32.74 
 
 
235 aa  130  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  0.240866  normal 
 
 
-
 
NC_013173  Dbac_2442  response regulator receiver and unknown domain protein  36.8 
 
 
227 aa  130  2.0000000000000002e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3597  response regulator receiver and unknown domain protein  38.53 
 
 
228 aa  130  2.0000000000000002e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0616  response regulator  32.74 
 
 
230 aa  130  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011773  BCAH820_0633  response regulator  31.56 
 
 
235 aa  130  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4743  response regulator  32.74 
 
 
230 aa  130  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0490  response regulator  31.56 
 
 
235 aa  129  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  hitchhiker  0.00461557  n/a   
 
 
-
 
NC_011725  BCB4264_A0596  response regulator  32.3 
 
 
230 aa  129  5.0000000000000004e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4178  response regulator receiver/unknown domain-containing protein  36.44 
 
 
233 aa  129  5.0000000000000004e-29  Mycobacterium sp. MCS  Bacteria  normal  0.0312835  n/a   
 
 
-
 
NC_009457  VC0395_A1209  response regulator  36.28 
 
 
228 aa  129  5.0000000000000004e-29  Vibrio cholerae O395  Bacteria  decreased coverage  0.000538312  n/a   
 
 
-
 
NC_008705  Mkms_4244  Fis family transcriptional regulator  36.44 
 
 
233 aa  129  5.0000000000000004e-29  Mycobacterium sp. KMS  Bacteria  normal  0.0391426  normal  0.137126 
 
 
-
 
NC_009077  Mjls_4400  Fis family transcriptional regulator  36.44 
 
 
233 aa  129  5.0000000000000004e-29  Mycobacterium sp. JLS  Bacteria  normal  0.328489  normal 
 
 
-
 
NC_003909  BCE_0640  response regulator  32 
 
 
235 aa  128  6e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0491  response regulator receiver  31.25 
 
 
235 aa  128  7.000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1958  DNA-binding transcriptional activator DcuR  34.2 
 
 
237 aa  127  1.0000000000000001e-28  Serratia proteamaculans 568  Bacteria  normal  normal  0.0209132 
 
 
-
 
NC_009436  Ent638_2556  DNA-binding transcriptional activator DcuR  35.81 
 
 
239 aa  127  1.0000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  normal  0.109677 
 
 
-
 
NC_011830  Dhaf_1239  response regulator receiver and unknown domain protein  34.65 
 
 
225 aa  127  2.0000000000000002e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0291668  n/a   
 
 
-
 
NC_008554  Sfum_3992  response regulator receiver/unknown domain-containing protein  33.92 
 
 
231 aa  127  2.0000000000000002e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000025564  normal 
 
 
-
 
NC_009674  Bcer98_0497  response regulator receiver  30.8 
 
 
235 aa  126  3e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2899  response regulator receiver/unknown domain-containing protein  35.06 
 
 
228 aa  124  1e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4101  DNA-binding transcriptional activator DcuR  35.9 
 
 
240 aa  124  1e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3909  DNA-binding transcriptional activator DcuR  37.18 
 
 
240 aa  123  2e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2326  response regulator receiver and unknown domain protein  32.9 
 
 
241 aa  122  7e-27  Dickeya zeae Ech1591  Bacteria  normal  0.500594  n/a   
 
 
-
 
NC_012917  PC1_0039  DNA-binding transcriptional activator DcuR  35.29 
 
 
240 aa  121  7e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4558  DNA-binding transcriptional activator DcuR  37.5 
 
 
239 aa  121  7e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_14110  response regulator of citrate/malate metabolism  38.89 
 
 
238 aa  121  9e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0325971  n/a   
 
 
-
 
NC_013421  Pecwa_0045  DNA-binding transcriptional activator DcuR  35.47 
 
 
240 aa  120  9.999999999999999e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B4566  DNA-binding transcriptional activator DcuR  37.5 
 
 
239 aa  121  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4649  DNA-binding transcriptional activator DcuR  37.5 
 
 
239 aa  121  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.420528  normal  0.899721 
 
 
-
 
NC_011205  SeD_A4698  DNA-binding transcriptional activator DcuR  37.5 
 
 
239 aa  121  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4649  DNA-binding transcriptional activator DcuR  37.5 
 
 
239 aa  121  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4310  response regulator receiver and unknown domain protein  33.33 
 
 
241 aa  120  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000453171  n/a   
 
 
-
 
NC_009921  Franean1_3357  response regulator receiver/unknown domain-containing protein  39.91 
 
 
251 aa  119  3.9999999999999996e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0930  response regulator receiver  34.93 
 
 
226 aa  119  3.9999999999999996e-26  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4345  response regulator  31.25 
 
 
225 aa  119  3.9999999999999996e-26  Bacillus cereus G9842  Bacteria  normal  0.158783  hitchhiker  0.00000000000467704 
 
 
-
 
CP001509  ECD_03995  DNA-binding response regulator in two-component regulatory system with DcuS  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3868  response regulator receiver and unknown domain protein  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4591  DNA-binding transcriptional activator DcuR  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4678  DNA-binding transcriptional activator DcuR  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3903  DNA-binding transcriptional activator DcuR  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli ATCC 8739  Bacteria  normal  0.71711  normal 
 
 
-
 
NC_009800  EcHS_A4365  DNA-binding transcriptional activator DcuR  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli HS  Bacteria  normal  0.414132  n/a   
 
 
-
 
NC_012892  B21_03956  hypothetical protein  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5638  DNA-binding transcriptional activator DcuR  37.07 
 
 
239 aa  119  4.9999999999999996e-26  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0812  response regulator receiver  30.8 
 
 
225 aa  118  6e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0577  response regulator  31.16 
 
 
224 aa  117  9.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3172  response regulator receiver/unknown domain-containing protein  37 
 
 
228 aa  117  1.9999999999999998e-25  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00871756  normal 
 
 
-
 
NC_009665  Shew185_0905  response regulator receiver  34.51 
 
 
226 aa  116  1.9999999999999998e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0501  two-component response regulator  28.38 
 
 
222 aa  116  3e-25  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0835  response regulator receiver/unknown domain-containing protein  37.78 
 
 
233 aa  115  3.9999999999999997e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.256612  normal  0.0817521 
 
 
-
 
NC_008261  CPF_0512  two-component response regulator  29.15 
 
 
222 aa  115  3.9999999999999997e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0939  response regulator receiver  34.51 
 
 
226 aa  116  3.9999999999999997e-25  Shewanella baltica OS195  Bacteria  normal  normal  0.0896662 
 
 
-
 
NC_011725  BCB4264_A0966  response regulator  30.8 
 
 
225 aa  116  3.9999999999999997e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0877  response regulator receiver/unknown domain-containing protein  34.07 
 
 
226 aa  115  5e-25  Shewanella sp. MR-7  Bacteria  normal  0.452942  normal 
 
 
-
 
NC_008726  Mvan_4698  response regulator receiver/unknown domain-containing protein  35.74 
 
 
229 aa  115  5e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.423451  normal 
 
 
-
 
NC_008321  Shewmr4_3095  response regulator receiver/unknown domain-containing protein  34.07 
 
 
226 aa  115  6e-25  Shewanella sp. MR-4  Bacteria  normal  0.0654926  normal 
 
 
-
 
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