8 homologs were found in PanDaTox collection
for query gene Svir_35880 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_35880  hypothetical protein  100 
 
 
137 aa  265  2e-70  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.49985  normal  0.306805 
 
 
-
 
NC_013093  Amir_0280  hypothetical protein  44.23 
 
 
138 aa  70.1  0.00000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25260  TadE-like protein  38.26 
 
 
132 aa  65.9  0.0000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4299  TadE-like  43.24 
 
 
295 aa  64.3  0.0000000006  Frankia sp. CcI3  Bacteria  normal  0.288116  normal 
 
 
-
 
NC_009338  Mflv_1387  hypothetical protein  38.17 
 
 
184 aa  53.9  0.0000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0173098  normal  0.31131 
 
 
-
 
NC_014158  Tpau_3885  hypothetical protein  42.72 
 
 
102 aa  52  0.000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18160  hypothetical protein  40.37 
 
 
147 aa  44.3  0.0005  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5188  hypothetical protein  41.3 
 
 
92 aa  41.6  0.004  Mycobacterium sp. JLS  Bacteria  normal  0.349005  decreased coverage  0.0000671692 
 
 
-
 
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