More than 300 homologs were found in PanDaTox collection
for query gene Svir_23050 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_23050  short-chain dehydrogenase of unknown substrate specificity  100 
 
 
246 aa  483  1e-135  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.223324 
 
 
-
 
NC_013131  Caci_6413  short-chain dehydrogenase/reductase SDR  47.33 
 
 
255 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0597317 
 
 
-
 
NC_009921  Franean1_5718  short-chain dehydrogenase/reductase SDR  44.94 
 
 
276 aa  181  1e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0818  short-chain dehydrogenase/reductase SDR  43.8 
 
 
278 aa  169  4e-41  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3253  short-chain dehydrogenase/reductase SDR  38.93 
 
 
264 aa  144  9e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.200417  normal  0.189117 
 
 
-
 
NC_009513  Lreu_0660  short-chain dehydrogenase/reductase SDR  35.71 
 
 
284 aa  126  3e-28  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  35.83 
 
 
269 aa  123  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  38.16 
 
 
272 aa  124  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_008699  Noca_3561  short chain dehydrogenase  36.69 
 
 
276 aa  117  9.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0469  short-chain dehydrogenase/reductase SDR  39.25 
 
 
251 aa  114  1.0000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.17 
 
 
264 aa  114  1.0000000000000001e-24  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008726  Mvan_4623  short-chain dehydrogenase/reductase SDR  35.78 
 
 
265 aa  114  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  34.78 
 
 
262 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.64 
 
 
262 aa  112  8.000000000000001e-24  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1320  short-chain dehydrogenase/reductase SDR  35.71 
 
 
269 aa  110  2.0000000000000002e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3521  short-chain dehydrogenase/reductase SDR  37.12 
 
 
268 aa  110  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  30.49 
 
 
264 aa  109  4.0000000000000004e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  30.49 
 
 
264 aa  109  4.0000000000000004e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  30.49 
 
 
264 aa  109  4.0000000000000004e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  32.54 
 
 
230 aa  109  5e-23  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  30.49 
 
 
264 aa  109  5e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  30.49 
 
 
264 aa  109  5e-23  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009767  Rcas_1156  short-chain dehydrogenase/reductase SDR  36.11 
 
 
269 aa  108  5e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0553  short-chain dehydrogenase/reductase SDR  35.71 
 
 
255 aa  108  6e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  30.08 
 
 
264 aa  108  8.000000000000001e-23  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  30.49 
 
 
264 aa  108  9.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  30.08 
 
 
264 aa  107  2e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  35.69 
 
 
266 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3849  short-chain dehydrogenase/reductase SDR  38.76 
 
 
314 aa  107  2e-22  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0687851  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  29.67 
 
 
264 aa  106  3e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  30.08 
 
 
264 aa  106  3e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  32.68 
 
 
285 aa  106  3e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  31 
 
 
263 aa  105  5e-22  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  31 
 
 
321 aa  105  8e-22  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  38.39 
 
 
265 aa  104  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  29.27 
 
 
264 aa  103  2e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5549  short-chain dehydrogenase/reductase SDR  33.46 
 
 
269 aa  104  2e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3406  3-oxoacyl-(acyl-carrier-protein) reductase  40.96 
 
 
249 aa  103  3e-21  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  34.38 
 
 
280 aa  103  3e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_013131  Caci_4868  short-chain dehydrogenase/reductase SDR  33.46 
 
 
317 aa  103  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00194851  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  35.14 
 
 
260 aa  102  4e-21  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  29.91 
 
 
231 aa  103  4e-21  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  29.91 
 
 
231 aa  103  4e-21  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  34.9 
 
 
262 aa  102  5e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0085  short-chain dehydrogenase/reductase SDR  33.49 
 
 
250 aa  102  5e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2629  short-chain dehydrogenase/reductase SDR  36.6 
 
 
317 aa  102  6e-21  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  33.06 
 
 
259 aa  101  8e-21  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_013922  Nmag_1126  short-chain dehydrogenase/reductase SDR  36.6 
 
 
338 aa  102  8e-21  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2968  short-chain dehydrogenase/reductase SDR  38.8 
 
 
272 aa  101  1e-20  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.118258  normal 
 
 
-
 
NC_008148  Rxyl_2457  short-chain dehydrogenase/reductase SDR  34.62 
 
 
291 aa  101  1e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0300911  n/a   
 
 
-
 
NC_012029  Hlac_0964  short-chain dehydrogenase/reductase SDR  38.92 
 
 
306 aa  100  1e-20  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_009523  RoseRS_3145  short-chain dehydrogenase/reductase SDR  36.92 
 
 
535 aa  101  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.61705 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  27.23 
 
 
242 aa  100  2e-20  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0909  short chain dehydrogenase  31.28 
 
 
273 aa  100  2e-20  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.34519  n/a   
 
 
-
 
NC_011365  Gdia_3539  short-chain dehydrogenase/reductase SDR  36.61 
 
 
271 aa  100  2e-20  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  35.32 
 
 
267 aa  100  3e-20  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  36.22 
 
 
281 aa  100  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  36.55 
 
 
265 aa  100  3e-20  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_009654  Mmwyl1_0908  short-chain dehydrogenase/reductase SDR  34.95 
 
 
242 aa  99.8  4e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3237  short chain dehydrogenase  34.93 
 
 
274 aa  99.4  4e-20  Caulobacter sp. K31  Bacteria  normal  normal  0.996911 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  35.22 
 
 
257 aa  99.4  5e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_008698  Tpen_1770  short-chain dehydrogenase/reductase SDR  35.32 
 
 
234 aa  99.4  5e-20  Thermofilum pendens Hrk 5  Archaea  normal  0.0933094  n/a   
 
 
-
 
NC_013235  Namu_5046  short-chain dehydrogenase/reductase SDR  35.34 
 
 
291 aa  99.4  5e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2074  3-ketoacyl-(acyl-carrier-protein) reductase  33.82 
 
 
238 aa  99  6e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  27.46 
 
 
255 aa  99  6e-20  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3722  short-chain dehydrogenase/reductase SDR  30.74 
 
 
267 aa  99  6e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.848764  n/a   
 
 
-
 
NC_013517  Sterm_0395  short-chain dehydrogenase/reductase SDR  32.97 
 
 
275 aa  99  7e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  33.86 
 
 
266 aa  98.6  8e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  40.49 
 
 
276 aa  98.6  8e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  34.02 
 
 
266 aa  98.6  8e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  35.79 
 
 
264 aa  98.6  8e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05398  oxidoreductase protein  37.37 
 
 
250 aa  98.6  9e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.979699 
 
 
-
 
NC_011138  MADE_03395  short-chain alcohol dehydrogenase-like protein  29.54 
 
 
281 aa  98.2  9e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  32.72 
 
 
238 aa  97.8  1e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_007511  Bcep18194_B1347  short chain dehydrogenase  35.75 
 
 
258 aa  98.2  1e-19  Burkholderia sp. 383  Bacteria  normal  normal  0.371645 
 
 
-
 
NC_010515  Bcenmc03_5800  short chain dehydrogenase  34.25 
 
 
258 aa  97.8  1e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3866  short chain dehydrogenase  34.25 
 
 
258 aa  97.8  1e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.293753  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  37.89 
 
 
270 aa  97.8  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010338  Caul_2944  short-chain dehydrogenase/reductase SDR  34.82 
 
 
291 aa  97.8  1e-19  Caulobacter sp. K31  Bacteria  normal  0.0718028  normal 
 
 
-
 
NC_008543  Bcen2424_4503  short chain dehydrogenase  34.25 
 
 
258 aa  97.8  1e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0035  short-chain dehydrogenase/reductase SDR  38.25 
 
 
255 aa  97.1  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2977  short-chain dehydrogenase/reductase SDR  36.09 
 
 
268 aa  97.4  2e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.690113 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  33.2 
 
 
272 aa  97.4  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_008061  Bcen_3162  short-chain dehydrogenase/reductase SDR  31.11 
 
 
252 aa  97.4  2e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  36.84 
 
 
260 aa  97.4  2e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3901  short-chain dehydrogenase/reductase SDR  36.96 
 
 
280 aa  97.1  2e-19  Chelativorans sp. BNC1  Bacteria  normal  0.962145  n/a   
 
 
-
 
NC_008528  OEOE_1560  Short-chain dehydrogenase of various substrate specificities  32.81 
 
 
272 aa  97.4  2e-19  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0086  short-chain dehydrogenase/reductase SDR  34.07 
 
 
272 aa  97.4  2e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5206  short-chain dehydrogenase/reductase SDR  31.11 
 
 
252 aa  97.4  2e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0231345 
 
 
-
 
NC_008686  Pden_2157  short-chain dehydrogenase/reductase SDR  32.73 
 
 
243 aa  97.4  2e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.300132  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  32.3 
 
 
270 aa  97.4  2e-19  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5071  short-chain dehydrogenase/reductase SDR  31.11 
 
 
252 aa  97.4  2e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1462  short-chain dehydrogenase/reductase SDR  35.68 
 
 
266 aa  96.7  3e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2715  Short-chain dehydrogenase/reductase SDR  31.2 
 
 
254 aa  96.7  3e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.479047 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  38.1 
 
 
330 aa  96.7  3e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_011666  Msil_2581  short-chain dehydrogenase/reductase SDR  34.08 
 
 
285 aa  96.7  3e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.300574 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  34.19 
 
 
273 aa  97.1  3e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  30.86 
 
 
281 aa  96.7  3e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  30.2 
 
 
255 aa  97.1  3e-19  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  37.23 
 
 
330 aa  96.7  3e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
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