12 homologs were found in PanDaTox collection
for query gene Svir_00120 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_00120  hypothetical protein  100 
 
 
77 aa  144  5e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.8238  normal  0.172694 
 
 
-
 
NC_009077  Mjls_1305  CsbD family protein  57.14 
 
 
78 aa  69.7  0.00000000001  Mycobacterium sp. JLS  Bacteria  normal  normal  0.829473 
 
 
-
 
NC_008726  Mvan_1657  CsbD family protein  60.42 
 
 
98 aa  58.9  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.994274 
 
 
-
 
NC_008146  Mmcs_1276  CsbD-like protein  57.14 
 
 
78 aa  55.1  0.0000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1293  CsbD family protein  57.14 
 
 
78 aa  55.1  0.0000003  Mycobacterium sp. KMS  Bacteria  normal  0.48173  normal  0.157127 
 
 
-
 
NC_009338  Mflv_4791  hypothetical protein  59.52 
 
 
78 aa  52.4  0.000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.586089  normal 
 
 
-
 
NC_008146  Mmcs_2895  hypothetical protein  52.86 
 
 
120 aa  50.8  0.000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2939  hypothetical protein  52.86 
 
 
120 aa  50.8  0.000006  Mycobacterium sp. KMS  Bacteria  normal  0.203241  normal 
 
 
-
 
NC_009077  Mjls_2925  hypothetical protein  52.86 
 
 
124 aa  50.4  0.000008  Mycobacterium sp. JLS  Bacteria  normal  normal  0.405857 
 
 
-
 
NC_013441  Gbro_2564  hypothetical protein  46.94 
 
 
78 aa  48.5  0.00003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.100203  n/a   
 
 
-
 
NC_009338  Mflv_2022  CsbD family protein  48.98 
 
 
77 aa  46.2  0.0001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.705575  normal  0.58823 
 
 
-
 
NC_008726  Mvan_4701  CsbD family protein  48.72 
 
 
79 aa  45.4  0.0003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.396621  normal 
 
 
-
 
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