6 homologs were found in PanDaTox collection
for query gene Suden_0024 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0024  hypothetical protein  100 
 
 
340 aa  682    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1356  RNA-binding S4 domain protein  37.63 
 
 
736 aa  54.7  0.000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.284872  n/a   
 
 
-
 
NC_007964  Nham_3171  pseudouridine synthase, Rsu  36.9 
 
 
687 aa  49.7  0.00007  Nitrobacter hamburgensis X14  Bacteria  normal  0.601748  n/a   
 
 
-
 
NC_008044  TM1040_0590  DEAD/DEAH box helicase-like  45.83 
 
 
710 aa  49.7  0.00007  Ruegeria sp. TM1040  Bacteria  normal  hitchhiker  0.00331406 
 
 
-
 
NC_013165  Shel_02790  hypothetical protein  24.84 
 
 
349 aa  49.3  0.0001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.874218  normal 
 
 
-
 
NC_009485  BBta_1701  putative pseudouridine synthase, Rsu  31.06 
 
 
690 aa  43.1  0.007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.305016  normal  0.35374 
 
 
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