More than 300 homologs were found in PanDaTox collection
for query gene Strop_4336 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_4778  extracellular solute-binding protein  92.33 
 
 
600 aa  1133    Salinispora arenicola CNS-205  Bacteria  normal  0.584214  decreased coverage  0.0000356618 
 
 
-
 
NC_009380  Strop_4336  extracellular solute-binding protein  100 
 
 
599 aa  1228    Salinispora tropica CNB-440  Bacteria  normal  0.168516  normal  0.284884 
 
 
-
 
NC_013124  Afer_1141  extracellular solute-binding protein family 5  37.3 
 
 
612 aa  352  1e-95  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.121856  n/a   
 
 
-
 
NC_013124  Afer_1520  extracellular solute-binding protein family 5  37.17 
 
 
610 aa  351  2e-95  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1144  extracellular solute-binding protein family 5  35.54 
 
 
608 aa  346  8e-94  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.471002  n/a   
 
 
-
 
NC_013124  Afer_0886  extracellular solute-binding protein family 5  36.26 
 
 
610 aa  318  2e-85  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2666  extracellular solute-binding protein family 5  32.99 
 
 
617 aa  281  2e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  0.955399  n/a   
 
 
-
 
NC_009953  Sare_2145  extracellular solute-binding protein  32.34 
 
 
601 aa  255  2.0000000000000002e-66  Salinispora arenicola CNS-205  Bacteria  normal  0.377347  normal  0.0104158 
 
 
-
 
NC_013131  Caci_8321  extracellular solute-binding protein family 5  31.28 
 
 
643 aa  226  1e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.860873 
 
 
-
 
NC_013205  Aaci_2261  extracellular solute-binding protein family 5  29.9 
 
 
579 aa  213  1e-53  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0252536  n/a   
 
 
-
 
NC_013205  Aaci_2258  extracellular solute-binding protein family 5  29.47 
 
 
591 aa  198  3e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  unclonable  0.000000752385  n/a   
 
 
-
 
NC_013205  Aaci_2491  extracellular solute-binding protein family 5  27.99 
 
 
593 aa  186  1.0000000000000001e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  unclonable  0.00000117082  n/a   
 
 
-
 
NC_009484  Acry_1185  extracellular solute-binding protein  28.43 
 
 
532 aa  178  3e-43  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2492  extracellular solute-binding protein family 5  25.94 
 
 
568 aa  171  5e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.0000108616  n/a   
 
 
-
 
NC_011206  Lferr_2605  extracellular solute-binding protein family 5  24.23 
 
 
547 aa  154  2.9999999999999998e-36  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2992  peptide ABC transporter, periplasmic peptide-binding protein  24.17 
 
 
498 aa  152  1e-35  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.022499  n/a   
 
 
-
 
NC_011761  AFE_2987  peptide ABC transporter, periplasmic peptide-binding protein  25.77 
 
 
543 aa  152  2e-35  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2600  extracellular solute-binding protein family 5  25.83 
 
 
500 aa  152  2e-35  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1703  extracellular solute-binding protein family 5  27.68 
 
 
638 aa  101  5e-20  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1145  extracellular solute-binding protein  23.34 
 
 
565 aa  97.1  9e-19  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00838015  normal  0.546746 
 
 
-
 
NC_011729  PCC7424_0337  extracellular solute-binding protein family 5  23.83 
 
 
581 aa  96.7  1e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_4719  extracellular solute-binding protein  23.74 
 
 
591 aa  95.5  3e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  0.42042  normal 
 
 
-
 
NC_009720  Xaut_2760  extracellular solute-binding protein  23.32 
 
 
544 aa  92.8  1e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0788  extracellular solute-binding protein family 5  23.35 
 
 
576 aa  92  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.301156 
 
 
-
 
NC_011726  PCC8801_0359  extracellular solute-binding protein family 5  22.41 
 
 
607 aa  88.2  4e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A0265  oligopeptide-binding protein OppA  21.34 
 
 
566 aa  87.8  5e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2761  extracellular solute-binding protein  24.78 
 
 
544 aa  87.8  5e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4796  extracellular solute-binding protein family 5  23.96 
 
 
532 aa  87.8  6e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.478428  normal 
 
 
-
 
NC_003909  BCE_0247  oligopeptide ABC transporter, substrate-binding protein, putative  21.34 
 
 
567 aa  87  0.000000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.460021  n/a   
 
 
-
 
NC_010814  Glov_2097  4-phytase  23.74 
 
 
546 aa  86.7  0.000000000000001  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000775897  n/a   
 
 
-
 
NC_007947  Mfla_1483  extracellular solute-binding protein  22.61 
 
 
551 aa  84.3  0.000000000000005  Methylobacillus flagellatus KT  Bacteria  normal  0.228319  normal  0.152124 
 
 
-
 
NC_013161  Cyan8802_0366  extracellular solute-binding protein family 5  22.22 
 
 
607 aa  84.3  0.000000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0207  extracellular solute-binding protein  20.72 
 
 
567 aa  84  0.000000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0409  peptide ABC transporter, periplasmic peptide-binding protein  26.35 
 
 
527 aa  84  0.000000000000008  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0947  extracellular solute-binding protein family 5  23.31 
 
 
622 aa  83.6  0.000000000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0352  peptide ABC transporter, periplasmic peptide-binding protein  26.35 
 
 
527 aa  84  0.000000000000008  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0195  extracellular solute-binding protein  23.16 
 
 
526 aa  83.6  0.00000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0208  extracellular solute-binding protein  25.43 
 
 
575 aa  82  0.00000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1563  extracellular solute-binding protein  22.78 
 
 
588 aa  80.9  0.00000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.176735  normal  0.279007 
 
 
-
 
NC_013946  Mrub_1660  extracellular solute-binding protein family 5  24.4 
 
 
589 aa  80.9  0.00000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  0.299882  normal  0.183706 
 
 
-
 
NC_009616  Tmel_0564  extracellular solute-binding protein  24.86 
 
 
607 aa  80.5  0.00000000000008  Thermosipho melanesiensis BI429  Bacteria  unclonable  0.000010438  n/a   
 
 
-
 
NC_014248  Aazo_1172  family 1 extracellular solute-binding protein  22.3 
 
 
594 aa  80.1  0.00000000000009  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3311  extracellular solute-binding protein family 5  25.42 
 
 
560 aa  79  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0608  extracellular solute-binding protein  23.8 
 
 
566 aa  79.3  0.0000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2277  extracellular solute-binding protein family 5  23.33 
 
 
615 aa  79  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00527261  decreased coverage  0.000000000210766 
 
 
-
 
NC_011729  PCC7424_1649  extracellular solute-binding protein family 5  23.09 
 
 
584 aa  78.6  0.0000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0205  oligopeptide ABC transporter, oligopeptide-binding protein  24.21 
 
 
575 aa  78.2  0.0000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4682  extracellular solute-binding protein family 5  24.81 
 
 
532 aa  78.2  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_3074  extracellular solute-binding protein family 5  23.39 
 
 
621 aa  77.8  0.0000000000005  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000149398  normal  0.300897 
 
 
-
 
NC_013889  TK90_0599  extracellular solute-binding protein family 5  22.95 
 
 
619 aa  77.8  0.0000000000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.300607 
 
 
-
 
NC_011725  BCB4264_A0245  oligopeptide-binding protein OppA  24.94 
 
 
575 aa  77.8  0.0000000000005  Bacillus cereus B4264  Bacteria  normal  0.0551474  n/a   
 
 
-
 
NC_011988  Avi_5299  ABC transporter substrate binding protein (oligopeptide)  23.64 
 
 
556 aa  77.8  0.0000000000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1433  peptide ABC transporter, periplasmic peptide-binding protein  23.38 
 
 
538 aa  77  0.0000000000008  Geobacter sulfurreducens PCA  Bacteria  normal  0.948157  n/a   
 
 
-
 
NC_011772  BCG9842_B5080  oligopeptide-binding protein OppA  24.94 
 
 
575 aa  77  0.0000000000009  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1234  extracellular solute-binding protein  23.96 
 
 
538 aa  76.6  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.871598  normal  0.318753 
 
 
-
 
NC_013721  HMPREF0424_1058  extracellular solute-binding protein  22.33 
 
 
563 aa  76.3  0.000000000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.271211 
 
 
-
 
NC_007953  Bxe_C0146  peptide/opine/nickel ABC transporter periplasmic ligand-binding protein  22.5 
 
 
539 aa  76.3  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.29775 
 
 
-
 
NC_011661  Dtur_0293  extracellular solute-binding protein family 5  25.3 
 
 
640 aa  76.3  0.000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.835457  n/a   
 
 
-
 
NC_009674  Bcer98_0219  extracellular solute-binding protein  23.71 
 
 
575 aa  75.9  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1273  extracellular solute-binding protein family 5  22.65 
 
 
593 aa  75.1  0.000000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2657  extracellular solute-binding protein  22.49 
 
 
617 aa  75.5  0.000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.0000297428  n/a   
 
 
-
 
NC_012918  GM21_1590  extracellular solute-binding protein family 5  22.83 
 
 
534 aa  75.1  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_1169  oligopeptide-binding protein of oligopeptide ABC transporter  24.69 
 
 
587 aa  75.1  0.000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.317639  normal 
 
 
-
 
NC_009485  BBta_0882  putative ABC transporter, periplasmic binding protein  22.78 
 
 
539 aa  75.1  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0266  extracellular solute-binding protein family 5  24.52 
 
 
575 aa  75.1  0.000000000004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2546  extracellular solute-binding protein  21.65 
 
 
531 aa  74.7  0.000000000005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.145645  normal 
 
 
-
 
NC_008554  Sfum_1411  extracellular solute-binding protein  21.51 
 
 
559 aa  74.7  0.000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1687  extracellular solute-binding protein  23.65 
 
 
664 aa  74.3  0.000000000006  Thermotoga petrophila RKU-1  Bacteria  normal  0.789812  n/a   
 
 
-
 
NC_013131  Caci_5370  extracellular solute-binding protein family 5  25.74 
 
 
629 aa  73.9  0.000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358498 
 
 
-
 
NC_008752  Aave_0255  extracellular solute-binding protein  23.11 
 
 
531 aa  73.9  0.000000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.146115  normal 
 
 
-
 
NC_003909  BCE_0248  oligopeptide ABC transporter, oligopeptide-binding protein, putative  27.14 
 
 
575 aa  73.6  0.000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0209  oligopeptide ABC transporter, oligopeptide-binding protein  25.43 
 
 
575 aa  73.6  0.000000000009  Bacillus cereus E33L  Bacteria  normal  0.019765  n/a   
 
 
-
 
NC_013595  Sros_3167  ABC-type dipeptide transport system periplasmic component-like protein  22.03 
 
 
542 aa  73.2  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2595  extracellular solute-binding protein family 5  23.59 
 
 
589 aa  73.6  0.00000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.118312  normal 
 
 
-
 
NC_013171  Apre_0469  extracellular solute-binding protein family 5  23.1 
 
 
552 aa  73.2  0.00000000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1982  putative ABC transporter, periplasmic binding protein  20.72 
 
 
524 aa  73.2  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0990283  normal 
 
 
-
 
NC_003909  BCE_0209  oligopeptide ABC transporter, oligopeptide-binding protein  23.67 
 
 
536 aa  72.4  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1832  extracellular solute-binding protein family 5  20.59 
 
 
587 aa  72.8  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.315611  normal 
 
 
-
 
NC_011725  BCB4264_A0214  oligopeptide ABC transporter, oligopeptide-binding protein  24.06 
 
 
536 aa  72.8  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0391  extracellular solute-binding protein  23.61 
 
 
522 aa  72.4  0.00000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5138  putative periplasmic peptide-binding protein ABC transporter  22.97 
 
 
495 aa  72.8  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0462348 
 
 
-
 
NC_013159  Svir_19910  ABC-type dipeptide transport system, periplasmic component  24.11 
 
 
589 aa  72.8  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.000984023  hitchhiker  0.000242655 
 
 
-
 
NC_012852  Rleg_6144  extracellular solute-binding protein family 5  23.11 
 
 
533 aa  72.4  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.5133  hitchhiker  0.00348679 
 
 
-
 
NC_003909  BCE_0724  oligopeptide ABC transporter, oligopeptide-binding protein  24.71 
 
 
593 aa  72  0.00000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0473  nickel ABC transporter, solute-binding protein  24.02 
 
 
538 aa  72  0.00000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007530  GBAA_0231  oligopeptide ABC transporter oligopeptide-binding protein  25.45 
 
 
555 aa  72  0.00000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1851  4-phytase  23.24 
 
 
546 aa  72  0.00000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  decreased coverage  0.00963288  n/a   
 
 
-
 
NC_005945  BAS0623  oligopeptide ABC transporter oligopeptide-binding protein  24.71 
 
 
593 aa  71.6  0.00000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2270  extracellular solute-binding protein family 5  21.3 
 
 
580 aa  71.6  0.00000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0713  oligopeptide ABC transporter, oligopeptide-binding protein  24.71 
 
 
593 aa  71.6  0.00000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00303874 
 
 
-
 
NC_007530  GBAA_0656  oligopeptide ABC transporter oligopeptide-binding protein  24.71 
 
 
593 aa  71.6  0.00000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4579  extracellular solute-binding protein  24.72 
 
 
596 aa  71.2  0.00000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2321  extracellular solute-binding protein family 5  21.3 
 
 
580 aa  71.6  0.00000000004  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.815964 
 
 
-
 
NC_011368  Rleg2_5442  extracellular solute-binding protein family 5  27.38 
 
 
528 aa  71.6  0.00000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0169825 
 
 
-
 
NC_011773  BCAH820_0241  putative oligopeptide ABC transporter, oligopeptide-binding protein  25.45 
 
 
575 aa  71.2  0.00000000005  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0218  oligopeptide ABC transporter oligopeptide-binding protein  27.52 
 
 
559 aa  71.2  0.00000000005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5701  ABC-type dipeptide transport system periplasmic component-like protein  24.7 
 
 
607 aa  71.2  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.167771  normal 
 
 
-
 
NC_007778  RPB_4049  twin-arginine translocation pathway signal  23.56 
 
 
539 aa  71.2  0.00000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.684503  normal 
 
 
-
 
NC_007953  Bxe_C0140  peptide/opine/nickel ABC transporter periplasmic ligand-binding protein  22.92 
 
 
534 aa  71.2  0.00000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.259377  normal  0.633025 
 
 
-
 
NC_013946  Mrub_1663  extracellular solute-binding protein family 5  23.53 
 
 
578 aa  70.9  0.00000000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.0397427  normal  0.183706 
 
 
-
 
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