11 homologs were found in PanDaTox collection
for query gene Strop_1160 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_1160  hypothetical protein  100 
 
 		 113 aa  226  7e-59  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_2134  TetR family transcriptional regulator  83.58 
 
 		 205 aa  116  9.999999999999999e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.269562  normal  0.11419 
 
 
-
 
NC_009380  Strop_1173  regulatory protein, TetR  80.6 
 
 		 202 aa  113  6.9999999999999995e-25  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.959952 
 
 
-
 
NC_013235  Namu_1426  transcriptional regulator, TetR family  47.37 
 
 		 204 aa  45.8  0.0002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0803354  normal  1 
 
 
-
 
NC_009921  Franean1_0700  TetR family transcriptional regulator  54.55 
 
 		 178 aa  44.3  0.0006  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.665559 
 
 
-
 
NC_013131  Caci_6228  transcriptional regulator, TetR family  36.99 
 
 		 194 aa  43.9  0.0007  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.301912  normal  0.923303 
 
 
-
 
NC_012669  Bcav_1090  transcriptional regulator, TetR family  50 
 
 		 204 aa  43.5  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.141216  normal  1 
 
 
-
 
NC_013169  Ksed_22050  transcriptional regulator  44.44 
 
 		 199 aa  43.5  0.001  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.0903673 
 
 
-
 
NC_009077  Mjls_4191  TetR family transcriptional regulator  25.4 
 
 		 236 aa  42.4  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.513173  normal  1 
 
 
-
 
NC_013131  Caci_3998  transcriptional regulator, TetR family  40.62 
 
 		 205 aa  41.2  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0825494  normal  0.0160725 
 
 
-
 
NC_008699  Noca_4300  transcriptional regulator  41.67 
 
 		 225 aa  40.4  0.009  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
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