12 homologs were found in PanDaTox collection
for query gene Ssol_1340 on replicon CP001800
Organism: Sulfolobus solfataricus 98/2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001800  Ssol_1340  regulatory protein MarR  100 
 
 
299 aa  601  1.0000000000000001e-171  Sulfolobus solfataricus 98/2  Archaea  decreased coverage  0.00576351  n/a   
 
 
-
 
NC_013926  Aboo_0363  hypothetical protein  33.12 
 
 
326 aa  140  1.9999999999999998e-32  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1236  regulatory protein, MarR  38.6 
 
 
453 aa  46.2  0.0006  Methanococcus maripaludis C5  Archaea  normal  0.149898  n/a   
 
 
-
 
NC_009634  Mevan_1389  hypothetical protein  39.66 
 
 
453 aa  46.6  0.0006  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1400  regulatory protein MarR  35.09 
 
 
452 aa  44.7  0.002  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_0508  MarR family transcriptional regulator  35.09 
 
 
453 aa  44.7  0.002  Methanococcus maripaludis C6  Archaea  normal  0.508311  n/a   
 
 
-
 
NC_009012  Cthe_1570  extracellular solute-binding protein  28 
 
 
353 aa  44.3  0.003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5188  ROK family protein  29.58 
 
 
401 aa  43.9  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.0518111  normal 
 
 
-
 
NC_009073  Pcal_0142  ArsR family transcriptional regulator  41.86 
 
 
98 aa  43.9  0.004  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_007951  Bxe_A0003  MarR family transcriptional regulator  27.78 
 
 
212 aa  42.7  0.007  Burkholderia xenovorans LB400  Bacteria  normal  0.0838682  normal 
 
 
-
 
NC_010622  Bphy_3063  MarR family transcriptional regulator  27.78 
 
 
214 aa  42.7  0.007  Burkholderia phymatum STM815  Bacteria  normal  0.565179  normal  0.590776 
 
 
-
 
NC_010681  Bphyt_3929  transcriptional regulator, MarR family  27.78 
 
 
212 aa  42.4  0.009  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.000000837661  normal 
 
 
-
 
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