16 homologs were found in PanDaTox collection
for query gene Ssed_1876 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1876  hypothetical protein  100 
 
 
114 aa  231  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  decreased coverage  0.0000000114126 
 
 
-
 
NC_010506  Swoo_2711  hypothetical protein  80.77 
 
 
114 aa  184  4e-46  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.026388 
 
 
-
 
NC_009092  Shew_1554  hypothetical protein  67.26 
 
 
114 aa  166  1e-40  Shewanella loihica PV-4  Bacteria  normal  0.83721  normal 
 
 
-
 
NC_009438  Sputcn32_2239  hypothetical protein  62.28 
 
 
114 aa  155  2e-37  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2477  hypothetical protein  62.28 
 
 
114 aa  155  2e-37  Shewanella baltica OS185  Bacteria  normal  0.437697  n/a   
 
 
-
 
NC_009997  Sbal195_2597  hypothetical protein  62.28 
 
 
114 aa  155  2e-37  Shewanella baltica OS195  Bacteria  normal  normal  0.020036 
 
 
-
 
NC_011663  Sbal223_1867  hypothetical protein  62.28 
 
 
114 aa  155  2e-37  Shewanella baltica OS223  Bacteria  normal  0.015808  hitchhiker  0.000000593706 
 
 
-
 
NC_009052  Sbal_2484  hypothetical protein  61.4 
 
 
114 aa  151  4e-36  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2544  hypothetical protein  64.95 
 
 
114 aa  139  9.999999999999999e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1741  hypothetical protein  63.33 
 
 
115 aa  131  3.9999999999999996e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2639  hypothetical protein  53.1 
 
 
115 aa  129  1.0000000000000001e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1597  hypothetical protein  64.77 
 
 
115 aa  129  1.0000000000000001e-29  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1672  hypothetical protein  64.77 
 
 
115 aa  129  1.0000000000000001e-29  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00631315 
 
 
-
 
NC_008700  Sama_2068  hypothetical protein  60.42 
 
 
115 aa  127  4.0000000000000003e-29  Shewanella amazonensis SB2B  Bacteria  normal  0.784922  normal 
 
 
-
 
NC_008345  Sfri_2269  hypothetical protein  59.79 
 
 
114 aa  126  1.0000000000000001e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0671436  n/a   
 
 
-
 
NC_007954  Sden_1822  hypothetical protein  43.36 
 
 
113 aa  110  7.000000000000001e-24  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
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