65 homologs were found in PanDaTox collection
for query gene Sros_8138 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_8138  Negative regulator of beta-lactamase expression- like protein  100 
 
 
646 aa  1319    Streptosporangium roseum DSM 43021  Bacteria  normal  0.215113  normal  0.487089 
 
 
-
 
NC_013595  Sros_6273  Negative regulator of beta-lactamase expression- like protein  59.7 
 
 
666 aa  701    Streptosporangium roseum DSM 43021  Bacteria  normal  0.297593  normal  0.0360395 
 
 
-
 
NC_013947  Snas_6369  N-acetylmuramyl-L-alanine amidase negative regulator of AmpC, AmpD  52.22 
 
 
646 aa  590  1e-167  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2500  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  52.52 
 
 
628 aa  584  1.0000000000000001e-165  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2101  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  46.96 
 
 
638 aa  501  1e-140  Thermobaculum terrenum ATCC BAA-798  Bacteria  unclonable  0.000000000444895  n/a   
 
 
-
 
NC_009972  Haur_2270  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  44.99 
 
 
748 aa  472  1.0000000000000001e-131  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000172268  n/a   
 
 
-
 
NC_013595  Sros_3587  Negative regulator of beta-lactamase expression- like protein  38.12 
 
 
467 aa  230  5e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.115346  normal  0.267565 
 
 
-
 
NC_013595  Sros_3389  Negative regulator of beta-lactamase expression- like protein  36.5 
 
 
480 aa  222  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5785  N-acetylmuramoyl-L-alanine amidase  35.14 
 
 
477 aa  221  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.204427  normal  0.0325548 
 
 
-
 
NC_013595  Sros_7871  N-acetylmuramoyl-L-alanine amidase  34.83 
 
 
508 aa  213  7.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5368  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.61 
 
 
589 aa  201  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.621632  normal  0.350782 
 
 
-
 
NC_008148  Rxyl_2196  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  34.3 
 
 
490 aa  196  1e-48  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.800961  n/a   
 
 
-
 
NC_008148  Rxyl_3112  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  33.85 
 
 
496 aa  192  1e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1933  N-acetylmuramyl-L-alanine amidase negative regulator of AmpC, AmpD  40.13 
 
 
330 aa  132  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6415  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  26.24 
 
 
551 aa  85.9  0.000000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_0865  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  31.71 
 
 
321 aa  65.5  0.000000003  Natrialba magadii ATCC 43099  Archaea  normal  0.817413  n/a   
 
 
-
 
NC_008346  Swol_1062  negative regulator of beta-lactamase expression-like protein  30.34 
 
 
222 aa  60.5  0.0000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2966  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  34.23 
 
 
242 aa  59.7  0.0000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000101487  n/a   
 
 
-
 
NC_007947  Mfla_0213  N-acetyl-anhydromuranmyl-L-alanine amidase  28.9 
 
 
194 aa  57.4  0.0000009  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.815893 
 
 
-
 
NC_008786  Veis_1497  N-acetyl-anhydromuranmyl-L-alanine amidase  29.26 
 
 
199 aa  53.5  0.00001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2942  N-acetyl-anhydromuranmyl-L-alanine amidase  27.32 
 
 
203 aa  52.8  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  0.086172  n/a   
 
 
-
 
NC_011830  Dhaf_4820  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  33.9 
 
 
236 aa  52.8  0.00002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0627398  n/a   
 
 
-
 
NC_007973  Rmet_3089  N-acetyl-anhydromuranmyl-L-alanine amidase  26.97 
 
 
200 aa  52.4  0.00003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0865  N-acetyl-anhydromuranmyl-L-alanine amidase  28.42 
 
 
209 aa  51.6  0.00005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.27665  normal  0.1095 
 
 
-
 
NC_008740  Maqu_0954  N-acetyl-anhydromuranmyl-L-alanine amidase  26.04 
 
 
203 aa  50.8  0.00007  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0421  N-acetyl-anhydromuranmyl-L-alanine amidase  29.48 
 
 
181 aa  48.5  0.0003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0963  hypothetical protein  37.5 
 
 
579 aa  48.5  0.0003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008309  HS_0249  N-acetyl-anhydromuranmyl-L-alanine amidase  28.32 
 
 
189 aa  48.9  0.0003  Haemophilus somnus 129PT  Bacteria  normal  0.125284  n/a   
 
 
-
 
NC_006274  BCZK0777  N-acetylmuramoyl-L-alanine amidase  37.5 
 
 
579 aa  48.1  0.0004  Bacillus cereus E33L  Bacteria  decreased coverage  0.00112193  n/a   
 
 
-
 
NC_008709  Ping_2940  N-acetyl-anhydromuranmyl-L-alanine amidase  26.74 
 
 
181 aa  48.1  0.0005  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.434032 
 
 
-
 
NC_005945  BAS0829  N-acetylmuramoyl-L-alanine amidase  37.5 
 
 
397 aa  48.1  0.0005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0224  N-acetyl-anhydromuranmyl-L-alanine amidase  29.7 
 
 
186 aa  48.1  0.0005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0872  N-acetylmuramoyl-L-alanine amidase  37.5 
 
 
348 aa  47.8  0.0006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0823  N-acetyl-anhydromuranmyl-L-alanine amidase  25.86 
 
 
190 aa  47.8  0.0006  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0423  N-acetyl-anhydromuranmyl-L-alanine amidase  30.29 
 
 
181 aa  47.8  0.0007  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000285307  normal  0.0465773 
 
 
-
 
NC_007643  Rru_A0960  AmpD (negative regulator of AmpC)  33.33 
 
 
241 aa  47.4  0.0008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0865958  n/a   
 
 
-
 
NC_003909  BCE_0962  hypothetical protein  36.36 
 
 
579 aa  47.4  0.0009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0777  N-acetylmuramoyl-L-alanine amidase  34.57 
 
 
567 aa  46.6  0.001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.173449  n/a   
 
 
-
 
NC_008463  PA14_72400  putative N-acetylmuramoyl-L-alanine amidase family protein  36.26 
 
 
259 aa  47  0.001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.219939  normal 
 
 
-
 
NC_009656  PSPA7_6284  putative lipoprotein  36.26 
 
 
259 aa  47  0.001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0669  N-acetyl-anhydromuranmyl-L-alanine amidase  28.92 
 
 
188 aa  46.2  0.002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0866  N-acetyl-anhydromuranmyl-L-alanine amidase  25.27 
 
 
190 aa  45.8  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.324538  n/a   
 
 
-
 
NC_011772  BCG9842_B4405  N-acetylmuramoyl-L-alanine amidase  34.57 
 
 
567 aa  45.8  0.002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000032251 
 
 
-
 
NC_011725  BCB4264_A0925  N-acetylmuramoyl-L-alanine amidase  34.57 
 
 
572 aa  45.8  0.002  Bacillus cereus B4264  Bacteria  normal  0.702364  n/a   
 
 
-
 
NC_011658  BCAH187_A1050  hypothetical protein  36.36 
 
 
578 aa  46.2  0.002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2640  N-acetyl-anhydromuranmyl-L-alanine amidase  28.24 
 
 
212 aa  45.4  0.003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0524  N-acetylmuramoyl-L-alanine amidase domain-containing protein  26.51 
 
 
341 aa  45.4  0.003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2018  putative N-acetylmuramoyl-L-alanine amidase  26.51 
 
 
341 aa  45.4  0.003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0631477  n/a   
 
 
-
 
NC_008322  Shewmr7_3602  N-acetyl-anhydromuranmyl-L-alanine amidase  29.89 
 
 
179 aa  45.1  0.004  Shewanella sp. MR-7  Bacteria  normal  0.288679  normal 
 
 
-
 
NC_012560  Avin_01970  N-acetylmuramoyl-L-alanine amidase protein  29.01 
 
 
258 aa  45.1  0.004  Azotobacter vinelandii DJ  Bacteria  normal  0.0442521  n/a   
 
 
-
 
NC_007614  Nmul_A1812  N-acetyl-anhydromuranmyl-L-alanine amidase  27.81 
 
 
181 aa  45.1  0.004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0372  N-acetyl-anhydromuranmyl-L-alanine amidase  25.28 
 
 
190 aa  44.7  0.005  Shewanella amazonensis SB2B  Bacteria  normal  0.672773  hitchhiker  0.000087686 
 
 
-
 
NC_010551  BamMC406_0521  N-acetyl-anhydromuranmyl-L-alanine amidase  32.17 
 
 
196 aa  44.7  0.005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.5108  normal  0.316585 
 
 
-
 
NC_010524  Lcho_0381  N-acetyl-anhydromuranmyl-L-alanine amidase  26.63 
 
 
209 aa  45.1  0.005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0550988 
 
 
-
 
NC_008321  Shewmr4_0425  N-acetyl-anhydromuranmyl-L-alanine amidase  29.89 
 
 
179 aa  44.7  0.005  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3386  N-acetyl-anhydromuranmyl-L-alanine amidase  27.43 
 
 
193 aa  44.3  0.007  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0597  N-acetylmuramoyl-L-alanine amidase domain-containing protein  25.3 
 
 
341 aa  44.3  0.007  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0707  N-acetylmuramoyl-L-alanine amidase domain-containing protein  25.3 
 
 
341 aa  44.3  0.007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0751  N-acetylmuramoyl-L-alanine amidase domain-containing protein  25.3 
 
 
341 aa  44.3  0.007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.961775  n/a   
 
 
-
 
NC_009079  BMA10247_A1662  N-acetylmuramoyl-L-alanine amidase domain-containing protein  25.3 
 
 
341 aa  44.3  0.007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0113  N-acetyl-anhydromuranmyl-L-alanine amidase  31.36 
 
 
183 aa  44.3  0.007  Escherichia coli SMS-3-5  Bacteria  normal  0.933893  normal  0.409809 
 
 
-
 
NC_010658  SbBS512_E0103  N-acetyl-anhydromuranmyl-L-alanine amidase  31.36 
 
 
183 aa  44.3  0.007  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1896  N-acetylmuramoyl-L-alanine amidase  28.99 
 
 
265 aa  43.9  0.008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.126557  normal 
 
 
-
 
NC_008345  Sfri_3780  N-acetyl-anhydromuranmyl-L-alanine amidase  25.44 
 
 
184 aa  43.9  0.008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0877  N-acetylmuramoyl-L-alanine amidase domain-containing protein  22.89 
 
 
383 aa  43.9  0.01  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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