13 homologs were found in PanDaTox collection
for query gene Sros_6260 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_6260  hypothetical protein  100 
 
 
121 aa  243  9e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0448262 
 
 
-
 
NC_009953  Sare_4154  hypothetical protein  77.5 
 
 
120 aa  203  5e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.769718  decreased coverage  0.00010257 
 
 
-
 
NC_009380  Strop_3772  hypothetical protein  76.67 
 
 
120 aa  202  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal  0.413577 
 
 
-
 
NC_013947  Snas_0362  hypothetical protein  69.17 
 
 
121 aa  182  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.461956  normal 
 
 
-
 
NC_013526  Tter_2738  hypothetical protein  42.37 
 
 
122 aa  108  2.0000000000000002e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0105782  n/a   
 
 
-
 
NC_009455  DehaBAV1_0021  hypothetical protein  43.97 
 
 
128 aa  92.8  2e-18  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0022  hypothetical protein  42.86 
 
 
128 aa  90.5  8e-18  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0438869  n/a   
 
 
-
 
NC_009523  RoseRS_0160  hypothetical protein  39.64 
 
 
154 aa  88.2  4e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0672  hypothetical protein  47.06 
 
 
146 aa  74.3  0.0000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.259029 
 
 
-
 
NC_013757  Gobs_1634  protein of unknown function DUF1696  31.07 
 
 
124 aa  47.8  0.00005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0936562  n/a   
 
 
-
 
NC_008532  STER_1528  hypothetical protein  28.97 
 
 
126 aa  43.1  0.001  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00537923  n/a   
 
 
-
 
NC_013093  Amir_2096  protein of unknown function DUF1696  29.81 
 
 
125 aa  43.1  0.001  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00367109  n/a   
 
 
-
 
NC_013165  Shel_11460  Protein of unknown function (DUF1696)  28.83 
 
 
125 aa  40  0.01  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.568663  normal 
 
 
-
 
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