More than 300 homologs were found in PanDaTox collection
for query gene Sros_6192 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_6192  ABC-type sugar transport system periplasmic component-like protein  100 
 
 
431 aa  873    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0222852  normal 
 
 
-
 
NC_011899  Hore_04610  extracellular solute-binding protein family 1  47.19 
 
 
431 aa  394  1e-108  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2293  extracellular solute-binding protein family 1  45.64 
 
 
425 aa  330  3e-89  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0656119  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  26.84 
 
 
424 aa  104  4e-21  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_010816  BLD_0192  MalE-type ABC sugar transport system periplasmic component  25.63 
 
 
463 aa  100  7e-20  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  27.49 
 
 
432 aa  98.6  2e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3128  extracellular solute-binding protein family 1  27.98 
 
 
450 aa  97.1  5e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0477771 
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  25.89 
 
 
432 aa  97.1  5e-19  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0780  extracellular solute-binding protein  26.96 
 
 
436 aa  95.1  2e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  23.7 
 
 
432 aa  93.6  6e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  24.52 
 
 
406 aa  91.7  2e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  26.01 
 
 
420 aa  92.4  2e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  26.01 
 
 
420 aa  92  2e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4174  extracellular solute-binding protein family 1  22.95 
 
 
426 aa  90.9  4e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4213  extracellular solute-binding protein family 1  22.95 
 
 
426 aa  90.9  4e-17  Cyanothece sp. PCC 8802  Bacteria  normal  0.215316  normal 
 
 
-
 
NC_011661  Dtur_0437  extracellular solute-binding protein family 1  24.66 
 
 
424 aa  90.1  7e-17  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000010114  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.88 
 
 
427 aa  89  1e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  25.84 
 
 
410 aa  89  1e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_011886  Achl_0895  extracellular solute-binding protein family 1  25.38 
 
 
436 aa  87.8  3e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.441999 
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  25.07 
 
 
438 aa  87.8  4e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  28.53 
 
 
414 aa  85.9  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_008541  Arth_3326  extracellular solute-binding protein  27 
 
 
453 aa  85.1  0.000000000000002  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00000398294  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  25.25 
 
 
416 aa  85.5  0.000000000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  26.73 
 
 
483 aa  84.3  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  27.22 
 
 
403 aa  83.2  0.000000000000007  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  28.05 
 
 
410 aa  82.8  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  23.97 
 
 
421 aa  81.3  0.00000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  27.39 
 
 
410 aa  81.3  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  24.79 
 
 
479 aa  80.9  0.00000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_011899  Hore_15560  extracellular solute-binding protein family 1  25.3 
 
 
418 aa  80.9  0.00000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  25.47 
 
 
454 aa  79.3  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.71 
 
 
447 aa  79  0.0000000000001  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_008254  Meso_3771  extracellular solute-binding protein  26.49 
 
 
421 aa  78.6  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3119  extracellular solute-binding protein family 1  25.61 
 
 
428 aa  78.2  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  25.97 
 
 
429 aa  78.2  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  28.01 
 
 
413 aa  77.8  0.0000000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_007516  Syncc9605_0108  twin-arginine translocation pathway signal  23.08 
 
 
435 aa  77  0.0000000000005  Synechococcus sp. CC9605  Bacteria  normal  normal  0.77402 
 
 
-
 
NC_008541  Arth_3329  extracellular solute-binding protein  25.37 
 
 
431 aa  77  0.0000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.0332045  n/a   
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  27.73 
 
 
423 aa  77  0.0000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  27.17 
 
 
422 aa  76.6  0.0000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_1126  extracellular solute-binding protein  26.36 
 
 
432 aa  75.9  0.000000000001  Arthrobacter sp. FB24  Bacteria  normal  0.190587  n/a   
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  27.31 
 
 
437 aa  75.9  0.000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  22.31 
 
 
411 aa  75.9  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_013093  Amir_0970  extracellular solute-binding protein family 1  32.72 
 
 
428 aa  75.1  0.000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  25.2 
 
 
421 aa  74.7  0.000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_012669  Bcav_2603  extracellular solute-binding protein family 1  25.26 
 
 
445 aa  74.3  0.000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0144502  normal 
 
 
-
 
NC_010001  Cphy_0529  extracellular solute-binding protein  22.11 
 
 
464 aa  74.3  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.361956  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  26.49 
 
 
457 aa  73.9  0.000000000005  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1199  extracellular solute-binding protein family 1  26.5 
 
 
432 aa  73.9  0.000000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000829014 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  30.04 
 
 
432 aa  73.2  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  25.75 
 
 
422 aa  72.4  0.00000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  25.47 
 
 
402 aa  72.4  0.00000000001  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  28.74 
 
 
444 aa  72.4  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013172  Bfae_17020  ABC-type sugar transport system, periplasmic component  23.84 
 
 
431 aa  71.6  0.00000000002  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00301962  n/a   
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  28.4 
 
 
430 aa  72  0.00000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3240  extracellular solute-binding protein  27.71 
 
 
434 aa  72  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  25 
 
 
405 aa  71.2  0.00000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2094  extracellular solute-binding protein family 1  23.87 
 
 
441 aa  71.2  0.00000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000152964 
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  31.88 
 
 
412 aa  71.2  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  22.19 
 
 
422 aa  70.9  0.00000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0265  extracellular solute-binding protein family 1  27.74 
 
 
510 aa  71.2  0.00000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  25.76 
 
 
445 aa  70.9  0.00000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_013530  Xcel_2537  extracellular solute-binding protein family 1  24.48 
 
 
450 aa  70.9  0.00000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.272028  n/a   
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  26.92 
 
 
434 aa  70.5  0.00000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  25 
 
 
412 aa  70.1  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_010816  BLD_1485  MalE-type ABC sugar transport system periplasmic component  25.51 
 
 
429 aa  69.7  0.00000000008  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.66 
 
 
504 aa  69.7  0.00000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  28.01 
 
 
419 aa  69.3  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  25 
 
 
412 aa  69.3  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_0152  putative sugar-binding protein  23.47 
 
 
436 aa  68.9  0.0000000002  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  24.74 
 
 
450 aa  68.9  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  22.93 
 
 
420 aa  68.6  0.0000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0499  extracellular solute-binding protein family 1  24.86 
 
 
434 aa  68.6  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000057577 
 
 
-
 
NC_013131  Caci_7516  extracellular solute-binding protein family 1  24.5 
 
 
452 aa  68.2  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  22.89 
 
 
410 aa  68.2  0.0000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  26.46 
 
 
437 aa  68.2  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2819  extracellular solute-binding protein family 1  24.29 
 
 
461 aa  67.8  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.491227  normal 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  23.72 
 
 
421 aa  67.8  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_012669  Bcav_0919  extracellular solute-binding protein family 1  28.09 
 
 
441 aa  67.4  0.0000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12078  sugar-binding lipoprotein  26.99 
 
 
439 aa  67.8  0.0000000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1150  extracellular solute-binding protein  23.65 
 
 
441 aa  67.8  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.344094  n/a   
 
 
-
 
NC_014210  Ndas_2036  extracellular solute-binding protein family 1  29.23 
 
 
439 aa  67.4  0.0000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.182591  normal  0.899466 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  22.07 
 
 
410 aa  67.4  0.0000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.21 
 
 
416 aa  67  0.0000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  24.15 
 
 
411 aa  67  0.0000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_008312  Tery_1604  extracellular solute-binding protein  21.11 
 
 
425 aa  67  0.0000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02930  carbohydrate-binding protein  25.07 
 
 
426 aa  67  0.0000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3566  extracellular solute-binding protein family 1  31.96 
 
 
426 aa  66.6  0.0000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  24.94 
 
 
420 aa  66.6  0.0000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013172  Bfae_29730  ABC-type sugar transport system, periplasmic component  23.87 
 
 
434 aa  66.6  0.0000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  23.68 
 
 
416 aa  66.2  0.0000000009  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_008820  P9303_01821  solute-binding family 1 protein  21.17 
 
 
434 aa  66.2  0.000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_3430  extracellular solute-binding protein family 1  24.44 
 
 
415 aa  65.9  0.000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  26.41 
 
 
445 aa  66.2  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  28.5 
 
 
415 aa  65.5  0.000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  29.21 
 
 
456 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  21.95 
 
 
441 aa  65.5  0.000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  23.73 
 
 
450 aa  64.7  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  25.51 
 
 
447 aa  64.7  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_012848  Rleg_4871  extracellular solute-binding protein family 1  26.75 
 
 
434 aa  64.7  0.000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.618682  normal  0.377624 
 
 
-
 
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