15 homologs were found in PanDaTox collection
for query gene Sros_5184 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_5184  hypothetical protein  100 
 
 
280 aa  536  1e-151  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0151548 
 
 
-
 
NC_010180  BcerKBAB4_5653  abortive infection protein  38.75 
 
 
302 aa  192  7e-48  Bacillus weihenstephanensis KBAB4  Bacteria  normal  normal  0.122774 
 
 
-
 
NC_013595  Sros_6387  hypothetical protein  37.59 
 
 
280 aa  137  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.319282 
 
 
-
 
NC_014151  Cfla_3234  Abortive infection protein  36 
 
 
303 aa  89.7  5e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0745236  normal  0.140668 
 
 
-
 
NC_007355  Mbar_A0055  hypothetical protein  35.96 
 
 
396 aa  59.7  0.00000005  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00436559  normal  0.0480998 
 
 
-
 
NC_007955  Mbur_2009  abortive infection protein  34.12 
 
 
271 aa  55.8  0.0000008  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0143983  n/a   
 
 
-
 
NC_014211  Ndas_5219  Abortive infection protein  30.1 
 
 
310 aa  52.4  0.000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.297366 
 
 
-
 
NC_014148  Plim_0769  Abortive infection protein  26.09 
 
 
775 aa  47.4  0.0003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1134  hypothetical protein  26.55 
 
 
280 aa  46.2  0.0006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1146  CAAX amino terminal protease family protein  34.52 
 
 
291 aa  45.4  0.001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_014158  Tpau_2204  Abortive infection protein  32.95 
 
 
204 aa  44.7  0.002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0164  abortive infection protein  28.32 
 
 
234 aa  43.9  0.003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1223  Abortive infection protein  32.97 
 
 
267 aa  43.9  0.003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0393  Abortive infection protein  28.04 
 
 
312 aa  42  0.01  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.00491577  normal  0.74185 
 
 
-
 
NC_013595  Sros_2649  abortive infection protein  30.7 
 
 
307 aa  42  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  0.161377  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>