6 homologs were found in PanDaTox collection
for query gene Sros_1768 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_1768    100 
 
 
319 bp  632  1e-179  Streptosporangium roseum DSM 43021  Bacteria  normal  decreased coverage  0.00278386 
 
 
-
 
NC_013595  Sros_7077    84.31 
 
 
348 bp  113  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5918  IS605 family transposase OrfB  100 
 
 
1200 bp  54  0.00002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.320804 
 
 
-
 
NC_009921  Franean1_3502  DNA (cytosine-5-)-methyltransferase  90.48 
 
 
1221 bp  52  0.0001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5850  IS605 family transposase OrfB  90.48 
 
 
1200 bp  52  0.0001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.707323 
 
 
-
 
NC_009921  Franean1_1215  DNA (cytosine-5-)-methyltransferase  96.3 
 
 
1200 bp  46.1  0.006  Frankia sp. EAN1pec  Bacteria  normal  0.0567342  normal  0.0860408 
 
 
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