10 homologs were found in PanDaTox collection
for query gene Spro_4180 on replicon NC_009832
Organism: Serratia proteamaculans 568



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_4180  restriction endonuclease  100 
 
 
196 aa  402  1e-111  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0325  restriction endonuclease  84.62 
 
 
196 aa  336  9.999999999999999e-92  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.00383479 
 
 
-
 
NC_009832  Spro_4097  restriction endonuclease  82.45 
 
 
208 aa  309  2e-83  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011986  Avi_9871  hypothetical protein  54.55 
 
 
187 aa  157  7e-38  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_013930  TK90_2800  restriction endonuclease  42.34 
 
 
207 aa  104  1e-21  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1408  restriction endonuclease  30.89 
 
 
302 aa  55.1  0.0000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0753  Mrr restriction system protein  30.65 
 
 
296 aa  50.8  0.00001  Campylobacter curvus 525.92  Bacteria  normal  0.113295  n/a   
 
 
-
 
NC_008699  Noca_1586  restriction endonuclease  30.08 
 
 
304 aa  49.3  0.00004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4287  restriction endonuclease  28.33 
 
 
291 aa  46.2  0.0003  Caulobacter sp. K31  Bacteria  normal  normal  0.253945 
 
 
-
 
NC_009483  Gura_3601  restriction endonuclease  27.2 
 
 
293 aa  42  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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