More than 300 homologs were found in PanDaTox collection
for query gene Snas_5345 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_5345  two component transcriptional regulator, winged helix family  100 
 
 
230 aa  454  1e-127  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.264155 
 
 
-
 
NC_013595  Sros_8764  response regulator receiver protein  62.05 
 
 
229 aa  254  6e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4670  two component transcriptional regulator, winged helix family  56.44 
 
 
234 aa  233  2.0000000000000002e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4069  two component transcriptional regulator, winged helix family  57.14 
 
 
232 aa  232  4.0000000000000004e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0969233  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  48.21 
 
 
227 aa  223  2e-57  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  46.43 
 
 
227 aa  214  7e-55  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_013131  Caci_4194  two component transcriptional regulator, winged helix family  50.21 
 
 
241 aa  209  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.100781  normal  0.264432 
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  45.09 
 
 
227 aa  208  5e-53  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  51.09 
 
 
236 aa  207  8e-53  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.69 
 
 
236 aa  198  5e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.91 
 
 
240 aa  198  7e-50  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  44.25 
 
 
236 aa  197  9e-50  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  44.25 
 
 
227 aa  197  1.0000000000000001e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  43.17 
 
 
231 aa  196  2.0000000000000003e-49  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  45 
 
 
231 aa  196  4.0000000000000005e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  43.11 
 
 
230 aa  195  4.0000000000000005e-49  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  47.53 
 
 
236 aa  195  6e-49  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  44.3 
 
 
237 aa  195  6e-49  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  44.89 
 
 
261 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  48.42 
 
 
245 aa  193  2e-48  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  47.19 
 
 
234 aa  192  3e-48  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  45.09 
 
 
237 aa  192  3e-48  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  48.42 
 
 
234 aa  192  4e-48  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2358  two component transcriptional regulator  43.56 
 
 
231 aa  192  5e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0136772  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  47.96 
 
 
234 aa  191  9e-48  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0132  response regulator receiver protein  48.21 
 
 
231 aa  191  9e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  46.19 
 
 
236 aa  191  1e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0214647 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  43.24 
 
 
229 aa  190  1e-47  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  46.67 
 
 
230 aa  191  1e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  41.85 
 
 
231 aa  189  2e-47  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  45.66 
 
 
230 aa  189  2.9999999999999997e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  46.4 
 
 
236 aa  189  4e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  46.05 
 
 
228 aa  189  4e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2145  DNA-binding response regulator  43.75 
 
 
232 aa  188  5e-47  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  44.55 
 
 
236 aa  188  5.999999999999999e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_013947  Snas_0721  two component transcriptional regulator, winged helix family  45.18 
 
 
233 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.811558  normal 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  45 
 
 
231 aa  187  1e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  39.01 
 
 
234 aa  187  1e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  43.56 
 
 
230 aa  186  2e-46  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  45.66 
 
 
230 aa  186  2e-46  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  38.43 
 
 
227 aa  185  5e-46  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_008043  TM1040_3335  two component transcriptional regulator  45.05 
 
 
230 aa  185  5e-46  Ruegeria sp. TM1040  Bacteria  normal  normal  0.428008 
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  42.73 
 
 
227 aa  185  5e-46  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  39.91 
 
 
234 aa  185  5e-46  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000121968  n/a   
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  39.38 
 
 
234 aa  184  9e-46  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  42.86 
 
 
242 aa  184  1.0000000000000001e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.559477 
 
 
-
 
NC_008819  NATL1_02061  two-component response regulator  44.54 
 
 
248 aa  184  1.0000000000000001e-45  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.540525 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  39.38 
 
 
232 aa  184  1.0000000000000001e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1546  two component transcriptional regulator, winged helix family  40.09 
 
 
237 aa  183  2.0000000000000003e-45  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000115937  n/a   
 
 
-
 
NC_007335  PMN2A_1500  two component transcriptional regulator  44.1 
 
 
248 aa  183  2.0000000000000003e-45  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  42.42 
 
 
242 aa  183  2.0000000000000003e-45  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  44.74 
 
 
237 aa  182  3e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3691  two component transcriptional regulator  43.11 
 
 
230 aa  182  3e-45  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  39.11 
 
 
231 aa  182  4.0000000000000006e-45  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  41.85 
 
 
247 aa  182  4.0000000000000006e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  44.74 
 
 
230 aa  182  6e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  39.91 
 
 
223 aa  181  7e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  39.91 
 
 
223 aa  181  7e-45  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  42.42 
 
 
243 aa  181  7e-45  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  40.87 
 
 
235 aa  181  7e-45  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1504  two component transcriptional regulator  43.48 
 
 
231 aa  181  1e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.263867  normal  0.57819 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  45.05 
 
 
226 aa  180  1e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  39.56 
 
 
228 aa  181  1e-44  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  44.1 
 
 
248 aa  180  1e-44  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_0295  two component transcriptional regulator, winged helix family  42.86 
 
 
242 aa  179  2e-44  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  45.05 
 
 
229 aa  180  2e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_009523  RoseRS_3737  two component transcriptional regulator  43.91 
 
 
231 aa  179  2e-44  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00273603 
 
 
-
 
NC_007948  Bpro_0543  two component transcriptional regulator  43.29 
 
 
241 aa  180  2e-44  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0307  two component transcriptional regulator, winged helix family  42.86 
 
 
242 aa  179  2e-44  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  40.62 
 
 
230 aa  179  2.9999999999999997e-44  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  44 
 
 
227 aa  179  2.9999999999999997e-44  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008541  Arth_1441  two component transcriptional regulator  44.39 
 
 
247 aa  179  2.9999999999999997e-44  Arthrobacter sp. FB24  Bacteria  normal  0.167327  n/a   
 
 
-
 
NC_013171  Apre_1215  two component transcriptional regulator, winged helix family  38.16 
 
 
237 aa  179  4e-44  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  44.64 
 
 
236 aa  179  4e-44  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_1712  two component transcriptional regulator  42.92 
 
 
248 aa  178  4.999999999999999e-44  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  42.41 
 
 
238 aa  178  4.999999999999999e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  41.13 
 
 
243 aa  178  5.999999999999999e-44  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  39.65 
 
 
223 aa  178  5.999999999999999e-44  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  41.13 
 
 
243 aa  178  5.999999999999999e-44  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal 
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  41.78 
 
 
243 aa  178  5.999999999999999e-44  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0817018 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  41.78 
 
 
225 aa  178  5.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  38.6 
 
 
233 aa  178  7e-44  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_013205  Aaci_1104  two component transcriptional regulator, winged helix family  42.67 
 
 
233 aa  177  8e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_04710  two component transcriptional regulator, winged helix family  41.3 
 
 
237 aa  178  8e-44  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  42.54 
 
 
235 aa  177  8e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  38.57 
 
 
223 aa  177  9e-44  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  41.05 
 
 
236 aa  177  9e-44  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3782  response regulator receiver  44.1 
 
 
297 aa  177  9e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4433  DNA-binding response regulator  39.3 
 
 
230 aa  177  1e-43  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  39.46 
 
 
223 aa  177  1e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1066  two component transcriptional regulator, winged helix family  43.95 
 
 
222 aa  177  1e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1197  response regulator receiver  45.09 
 
 
230 aa  177  1e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  43.04 
 
 
259 aa  177  1e-43  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4777  DNA-binding response regulator  39.3 
 
 
230 aa  177  1e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  41.56 
 
 
244 aa  177  1e-43  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  42.6 
 
 
226 aa  177  1e-43  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  44.49 
 
 
232 aa  177  1e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_01481  two-component response regulator  43.3 
 
 
248 aa  177  2e-43  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  42.79 
 
 
229 aa  176  2e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  39.01 
 
 
223 aa  176  2e-43  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
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