More than 300 homologs were found in PanDaTox collection
for query gene Snas_4836 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_4836  two component transcriptional regulator, LuxR family  100 
 
 
210 aa  409  1e-113  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  65.55 
 
 
213 aa  254  7e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  63.26 
 
 
232 aa  236  2e-61  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  60.09 
 
 
214 aa  231  6e-60  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  58.8 
 
 
220 aa  217  8.999999999999998e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  59.61 
 
 
209 aa  216  1e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.96 
 
 
225 aa  209  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  55.56 
 
 
226 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  55.45 
 
 
229 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.66 
 
 
218 aa  205  3e-52  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  53.05 
 
 
230 aa  205  4e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.95 
 
 
230 aa  204  7e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.87 
 
 
218 aa  202  3e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.11 
 
 
225 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  55.4 
 
 
226 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.63 
 
 
224 aa  201  6e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  53.55 
 
 
215 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.93 
 
 
224 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.27 
 
 
215 aa  199  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  199  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.75 
 
 
228 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  52.83 
 
 
213 aa  199  3e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.42 
 
 
220 aa  198  3.9999999999999996e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  53.24 
 
 
218 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.77 
 
 
218 aa  197  7.999999999999999e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50.92 
 
 
227 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.54 
 
 
226 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  50.23 
 
 
226 aa  196  3e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  49.28 
 
 
215 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.47 
 
 
225 aa  195  4.0000000000000005e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  49.77 
 
 
227 aa  194  8.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.34 
 
 
224 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  50.24 
 
 
220 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  48 
 
 
228 aa  194  1e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.53 
 
 
261 aa  193  2e-48  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.09 
 
 
230 aa  193  2e-48  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  51.61 
 
 
219 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.53 
 
 
221 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  49.3 
 
 
224 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.11 
 
 
220 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.46 
 
 
222 aa  191  6e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.94 
 
 
225 aa  191  7e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  52.34 
 
 
220 aa  191  7e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.43 
 
 
220 aa  191  7e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.55 
 
 
223 aa  191  7e-48  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  49.55 
 
 
234 aa  191  7e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  55.14 
 
 
220 aa  191  9e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  50.93 
 
 
215 aa  191  1e-47  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  49.3 
 
 
219 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.7 
 
 
234 aa  190  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.87 
 
 
239 aa  190  1e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.17 
 
 
226 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.31 
 
 
222 aa  190  2e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.05 
 
 
221 aa  189  2.9999999999999997e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  49.08 
 
 
222 aa  188  5e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  50.46 
 
 
220 aa  188  5.999999999999999e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  51.85 
 
 
230 aa  187  8e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50 
 
 
219 aa  187  9e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50 
 
 
220 aa  187  1e-46  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  187  1e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.39 
 
 
241 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  46.82 
 
 
223 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  48.8 
 
 
211 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.23 
 
 
225 aa  185  4e-46  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  50.23 
 
 
215 aa  185  4e-46  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.93 
 
 
225 aa  185  4e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.84 
 
 
222 aa  185  4e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.35 
 
 
234 aa  185  5e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  49.3 
 
 
223 aa  185  5e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  48.84 
 
 
228 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  50.93 
 
 
221 aa  185  5e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50.47 
 
 
219 aa  185  5e-46  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  44.44 
 
 
228 aa  185  5e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.85 
 
 
222 aa  184  6e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.54 
 
 
221 aa  184  8e-46  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.69 
 
 
223 aa  184  9e-46  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  50 
 
 
247 aa  183  1.0000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  49.55 
 
 
226 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  48.4 
 
 
228 aa  183  2.0000000000000003e-45  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  48.83 
 
 
219 aa  183  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  49.53 
 
 
216 aa  183  2.0000000000000003e-45  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  50.24 
 
 
225 aa  183  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.83 
 
 
225 aa  183  2.0000000000000003e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  50.47 
 
 
221 aa  182  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.13 
 
 
217 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  46.95 
 
 
239 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  50.93 
 
 
225 aa  182  4.0000000000000006e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  48.17 
 
 
225 aa  181  5.0000000000000004e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  48.37 
 
 
218 aa  182  5.0000000000000004e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.6 
 
 
218 aa  181  5.0000000000000004e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  52.56 
 
 
220 aa  181  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  50 
 
 
213 aa  181  6e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.17 
 
 
228 aa  181  7e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  48.6 
 
 
224 aa  181  7e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.98 
 
 
221 aa  181  8.000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  47.39 
 
 
216 aa  181  9.000000000000001e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.95 
 
 
225 aa  180  1e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.61 
 
 
221 aa  179  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
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