12 homologs were found in PanDaTox collection
for query gene Snas_3160 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_3160  PKD repeat-containing protein  100 
 
 
396 aa  813    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843652  hitchhiker  0.0000187562 
 
 
-
 
NC_013947  Snas_0023  PKD repeat-containing protein  38.52 
 
 
385 aa  252  8.000000000000001e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.347453  normal 
 
 
-
 
NC_009783  VIBHAR_02448  protease  38.84 
 
 
482 aa  231  2e-59  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0422  hypothetical protein  37.92 
 
 
476 aa  213  3.9999999999999995e-54  Vibrio cholerae O395  Bacteria  normal  0.0260128  n/a   
 
 
-
 
NC_007953  Bxe_C0201  chitinase like protein  27.25 
 
 
1204 aa  84.3  0.000000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.137759 
 
 
-
 
NC_013132  Cpin_2816  serine protease  28.19 
 
 
348 aa  73.2  0.000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.114661  normal 
 
 
-
 
NC_013730  Slin_2087  DNA/RNA non-specific endonuclease  28.26 
 
 
724 aa  55.5  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  0.29894  normal 
 
 
-
 
NC_007355  Mbar_A2975  hypothetical protein  28.49 
 
 
631 aa  53.5  0.000007  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0264248  normal  0.578454 
 
 
-
 
NC_013441  Gbro_2516  hypothetical protein  28.43 
 
 
401 aa  53.1  0.000009  Gordonia bronchialis DSM 43247  Bacteria  normal  0.15116  n/a   
 
 
-
 
NC_007643  Rru_A2291  DNA/RNA non-specific endonuclease  29.19 
 
 
721 aa  52.4  0.00002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.391468  n/a   
 
 
-
 
NC_013595  Sros_5196  V8-like protein Glu-specific endopeptidase-like protein  28.03 
 
 
694 aa  47.4  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.710887  normal  0.178037 
 
 
-
 
NC_009485  BBta_5484  hypothetical protein  27.61 
 
 
741 aa  44.3  0.004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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