277 homologs were found in PanDaTox collection
for query gene Snas_1828 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1828  extracellular solute-binding protein family 1  100 
 
 
455 aa  939    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.218215 
 
 
-
 
NC_009380  Strop_2722  hypothetical protein  42.07 
 
 
446 aa  379  1e-104  Salinispora tropica CNB-440  Bacteria  normal  0.107011  normal  0.632165 
 
 
-
 
NC_013595  Sros_6965  ABC-type sugar transport system periplasmic component-like protein  41.74 
 
 
475 aa  375  1e-102  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.292148 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  35.42 
 
 
433 aa  255  1.0000000000000001e-66  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  31.24 
 
 
436 aa  209  1e-52  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.56 
 
 
437 aa  191  2e-47  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27.74 
 
 
437 aa  186  9e-46  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  31.89 
 
 
445 aa  181  2e-44  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0332  extracellular solute-binding protein family 1  29.38 
 
 
468 aa  177  4e-43  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013202  Hmuk_2515  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
833 aa  167  4e-40  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0891124 
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  30.65 
 
 
433 aa  167  5e-40  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  29.93 
 
 
438 aa  161  2e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  30.1 
 
 
434 aa  159  7e-38  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  29.52 
 
 
439 aa  158  2e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  30.22 
 
 
436 aa  157  4e-37  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  28.21 
 
 
437 aa  157  4e-37  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  27.51 
 
 
438 aa  155  1e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_011988  Avi_5507  ABC transporter substrate binding protein (glycerol 3-phosphate)  27.39 
 
 
447 aa  155  1e-36  Agrobacterium vitis S4  Bacteria  normal  0.0724145  n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  28.35 
 
 
441 aa  152  1e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  28.26 
 
 
441 aa  152  2e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_012791  Vapar_4134  extracellular solute-binding protein family 1  30.96 
 
 
437 aa  151  2e-35  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  34.71 
 
 
458 aa  150  3e-35  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  27.25 
 
 
437 aa  150  6e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  34.29 
 
 
458 aa  149  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  149  1.0000000000000001e-34  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  34.29 
 
 
458 aa  149  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  34.39 
 
 
458 aa  149  1.0000000000000001e-34  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  28.12 
 
 
435 aa  149  1.0000000000000001e-34  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  149  1.0000000000000001e-34  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  149  1.0000000000000001e-34  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  149  1.0000000000000001e-34  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  34.29 
 
 
458 aa  148  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  34.29 
 
 
458 aa  148  2.0000000000000003e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  27.49 
 
 
444 aa  148  2.0000000000000003e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1287  extracellular solute-binding protein  30.11 
 
 
435 aa  147  3e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  33.97 
 
 
458 aa  147  3e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  29.12 
 
 
438 aa  147  4.0000000000000006e-34  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  33.97 
 
 
458 aa  147  5e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  28.6 
 
 
439 aa  147  5e-34  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  28.6 
 
 
439 aa  146  6e-34  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  28.6 
 
 
439 aa  146  6e-34  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  27.89 
 
 
441 aa  146  9e-34  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  145  1e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  28.88 
 
 
440 aa  145  1e-33  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  145  1e-33  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  29.36 
 
 
438 aa  144  2e-33  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  29.36 
 
 
438 aa  144  2e-33  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  144  2e-33  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  144  2e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  144  2e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  29.9 
 
 
438 aa  144  2e-33  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  28.51 
 
 
444 aa  145  2e-33  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  144  2e-33  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  28.67 
 
 
439 aa  145  2e-33  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  144  2e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  144  2e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  27.44 
 
 
441 aa  144  2e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  29.36 
 
 
438 aa  144  2e-33  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  33.76 
 
 
458 aa  145  2e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  144  2e-33  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0857  extracellular solute-binding protein  30.72 
 
 
437 aa  144  3e-33  Polaromonas sp. JS666  Bacteria  normal  normal  0.221606 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  29.36 
 
 
438 aa  144  3e-33  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  28.67 
 
 
439 aa  144  5e-33  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  33.65 
 
 
458 aa  143  5e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  28.12 
 
 
438 aa  142  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_008752  Aave_3650  extracellular solute-binding protein  29.89 
 
 
436 aa  142  9.999999999999999e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.144474  normal 
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.21 
 
 
441 aa  141  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1155  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  27.93 
 
 
434 aa  141  1.9999999999999998e-32  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5465  extracellular solute-binding protein  30.73 
 
 
434 aa  141  3e-32  Delftia acidovorans SPH-1  Bacteria  normal  0.355429  normal 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  27.96 
 
 
444 aa  141  3e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  27.94 
 
 
435 aa  140  3e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  28.54 
 
 
438 aa  140  3.9999999999999997e-32  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  28.54 
 
 
438 aa  140  3.9999999999999997e-32  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  28.6 
 
 
439 aa  139  7e-32  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  26.76 
 
 
441 aa  138  2e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2014  sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor  26.57 
 
 
433 aa  138  2e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.167012  hitchhiker  0.0071297 
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  27.13 
 
 
435 aa  139  2e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  26.89 
 
 
444 aa  138  2e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  27.04 
 
 
444 aa  138  3.0000000000000003e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  26.89 
 
 
443 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  27.11 
 
 
444 aa  137  3.0000000000000003e-31  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  26.89 
 
 
443 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  26.83 
 
 
446 aa  137  3.0000000000000003e-31  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  26.89 
 
 
444 aa  137  4e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  30.99 
 
 
445 aa  136  6.0000000000000005e-31  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  30.99 
 
 
445 aa  136  8e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.94 
 
 
441 aa  134  3e-30  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0646  extracellular solute-binding protein  28.68 
 
 
441 aa  130  4.0000000000000003e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.206924 
 
 
-
 
NC_011004  Rpal_0060  extracellular solute-binding protein family 1  28.93 
 
 
442 aa  130  7.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.700837  n/a   
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  28.62 
 
 
434 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_1459  ABC-type sugar transport system, periplasmic component  24.72 
 
 
457 aa  127  3e-28  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  26.37 
 
 
442 aa  127  6e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1646  extracellular solute-binding protein  28.41 
 
 
440 aa  126  6e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.143266 
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  27.5 
 
 
437 aa  126  7e-28  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
NC_007925  RPC_0404  extracellular solute-binding protein  27.78 
 
 
438 aa  124  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  27.05 
 
 
437 aa  124  4e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  24.7 
 
 
441 aa  124  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4373  extracellular solute-binding protein  27.2 
 
 
437 aa  124  5e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.104197  normal 
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  24.88 
 
 
433 aa  123  6e-27  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_011894  Mnod_1265  extracellular solute-binding protein family 1  28.22 
 
 
446 aa  122  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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