26 homologs were found in PanDaTox collection
for query gene Smed_6449 on replicon NC_009622
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009622  Smed_6449  plasmid stabilization system protein  100 
 
 		 86 aa  176  1e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.254511  normal  0.305922 
 
 
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NC_012848  Rleg_5066  plasmid stabilization system  71.43 
 
 		 91 aa  130  5e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
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NC_011368  Rleg2_5346  plasmid stabilization system  72.53 
 
 		 91 aa  115  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.461356 
 
 
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NC_010814  Glov_1683  plasmid stabilization system  62.64 
 
 		 91 aa  112  1.0000000000000001e-24  Geobacter lovleyi SZ  Bacteria  normal  0.294502  n/a   
 
 
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NC_009787  EcE24377A_C0021  RelE/ParE family plasmid stabilization system protein  61.54 
 
 		 91 aa  112  2.0000000000000002e-24  Escherichia coli E24377A  Bacteria  normal  0.941725  n/a   
 
 
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NC_011350  ECH74115_B0093  RelE/ParE family plasmid stabilization system protein  60.44 
 
 		 91 aa  110  8.000000000000001e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00661999  normal  1 
 
 
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NC_012857  Rpic12D_4447  plasmid stabilization system  60.44 
 
 		 91 aa  108  2.0000000000000002e-23  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00132305  normal  0.136677 
 
 
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NC_012855  Rpic12D_5046  plasmid stabilization system  60.44 
 
 		 91 aa  108  2.0000000000000002e-23  Ralstonia pickettii 12D  Bacteria  normal  0.353031  normal  1 
 
 
-
 
NC_010678  Rpic_4337  plasmid stabilization system  60.44 
 
 		 91 aa  108  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  0.17652  normal  0.215547 
 
 
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NC_010682  Rpic_1735  plasmid stabilization system  60.44 
 
 		 91 aa  108  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  0.416669  normal  0.375673 
 
 
-
 
NC_008347  Mmar10_0699  plasmid stabilization system protein  54.95 
 
 		 97 aa  103  6e-22  Maricaulis maris MCS10  Bacteria  decreased coverage  0.00627414  normal  0.782254 
 
 
-
 
NC_009436  Ent638_0480  plasmid stabilization system protein  40.66 
 
 		 91 aa  70.1  0.00000000001  Enterobacter sp. 638  Bacteria  normal  1  normal  0.414402 
 
 
-
 
NC_007514  Cag_0585  hypothetical protein  31.87 
 
 		 93 aa  51.6  0.000003  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000997841  n/a   
 
 
-
 
NC_007519  Dde_2903  hypothetical protein  35.16 
 
 		 89 aa  51.2  0.000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000303437  n/a   
 
 
-
 
NC_010831  Cphamn1_0141  plasmid stabilization system  27.37 
 
 		 96 aa  43.1  0.001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.802306  normal  0.722929 
 
 
-
 
NC_008639  Cpha266_1217  plasmid stabilization system protein  29.47 
 
 		 96 aa  43.1  0.001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.745656  n/a   
 
 
-
 
NC_009832  Spro_4586  addiction module antitoxin  40 
 
 		 94 aa  41.6  0.003  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_0980  putative plasmid stabilization system protein  28.42 
 
 		 96 aa  42  0.003  Chlorobium luteolum DSM 273  Bacteria  normal  0.224479  normal  1 
 
 
-
 
NC_012918  GM21_4067  addiction module toxin, RelE/StbE family  30.43 
 
 		 97 aa  41.6  0.003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010682  Rpic_1479  addiction module toxin, RelE/StbE family  32.56 
 
 		 94 aa  41.6  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.655349  hitchhiker  0.000000000000388244 
 
 
-
 
NC_010682  Rpic_1854  addiction module toxin, RelE/StbE family  32.56 
 
 		 94 aa  41.6  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.057882  unclonable  0.00000000000000929031 
 
 
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NC_007972  Rmet_6341  'toxin of a toxin/antitoxin system, parE-like; Plasmid stabilization system protein (IncP-1beta multiresistance plasmid pB8)Addiction module toxin, RelE/StbE'  32.56 
 
 		 94 aa  41.6  0.004  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.0000179089  unclonable  0.000000047635 
 
 
-
 
NC_012857  Rpic12D_4481  addiction module toxin, RelE/StbE family  32.56 
 
 		 94 aa  41.6  0.004  Ralstonia pickettii 12D  Bacteria  normal  1  hitchhiker  0.00000000164279 
 
 
-
 
NC_009832  Spro_0925  plasmid stabilization system protein  36.84 
 
 		 96 aa  40.8  0.006  Serratia proteamaculans 568  Bacteria  normal  0.785329  normal  1 
 
 
-
 
NC_010803  Clim_0113  plasmid stabilization system  27.78 
 
 		 92 aa  40.4  0.007  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3002  plasmid stabilization system  31.18 
 
 		 93 aa  40.8  0.007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.470139  n/a   
 
 
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