15 homologs were found in PanDaTox collection
for query gene Smed_6378 on replicon NC_009622
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009622  Smed_6378  XRE family transcriptional regulator  100 
 
 		 165 aa  335  1.9999999999999998e-91  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011986  Avi_9804  helix turn helix transcriptional regulator  49.66 
 
 		 160 aa  171  3.9999999999999995e-42  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009669  Oant_4548  helix-turn-helix domain-containing protein  42.77 
 
 		 181 aa  157  7e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011991  Avi_9645  hypothetical protein  45.52 
 
 		 163 aa  137  7e-32  Agrobacterium vitis S4  Bacteria  normal  0.085349  n/a   
 
 
-
 
NC_008242  Meso_4238  XRE family transcriptional regulator  39.58 
 
 		 154 aa  117  4.9999999999999996e-26  Chelativorans sp. BNC1  Bacteria  normal  0.0673449  n/a   
 
 
-
 
NC_008242  Meso_4162  hypothetical protein  32.69 
 
 		 167 aa  114  6e-25  Chelativorans sp. BNC1  Bacteria  normal  0.0787626  n/a   
 
 
-
 
NC_011986  Avi_9872  hypothetical protein  42.59 
 
 		 158 aa  97.1  1e-19  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009669  Oant_4600  helix-turn-helix domain-containing protein  35.04 
 
 		 176 aa  94.7  4e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_15940  predicted transcriptional regulator  32.31 
 
 		 119 aa  47  0.0001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0473945  hitchhiker  0.000000239728 
 
 
-
 
NC_010320  Teth514_0702  XRE family transcriptional regulator  30.58 
 
 		 137 aa  43.1  0.002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000217339  n/a   
 
 
-
 
NC_008531  LEUM_1899  hypothetical protein  31.96 
 
 		 171 aa  42.4  0.003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2793  transcriptional regulator, XRE family  27.93 
 
 		 108 aa  41.6  0.004  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000236555  n/a   
 
 
-
 
NC_013440  Hoch_4456  transcriptional regulator, XRE family  30.77 
 
 		 147 aa  41.2  0.006  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_1142  transcriptional regulator, XRE family  35.09 
 
 		 141 aa  41.2  0.006  Spirosoma linguale DSM 74  Bacteria  normal  0.343255  normal  0.597064 
 
 
-
 
NC_007799  ECH_1118  putative transcriptional regulator  30.3 
 
 		 213 aa  40.4  0.01  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
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