9 homologs were found in PanDaTox collection
for query gene Smed_6367 on replicon NC_009622
Organism: Sinorhizobium medicae WSM419



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009622  Smed_6367    100 
 
 		 425 bp  842    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009621  Smed_6073  XRE family transcriptional regulator  95 
 
 		 447 bp  406  1e-111  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009621  Smed_6134  XRE family transcriptional regulator  88.83 
 
 		 420 bp  377  1e-102  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.577442 
 
 
-
 
NC_007643  Rru_A3398  XRE family transcriptional regulator  89.8 
 
 		 543 bp  58  0.000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0154  helix-turn-helix domain-containing protein  92.5 
 
 		 405 bp  56  0.000008  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012852  Rleg_6091  transcriptional regulator, XRE family  92.11 
 
 		 459 bp  52  0.0001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009671  Oant_4689  putataive fimbrial chaperone protein  86.79 
 
 		 717 bp  50.1  0.0005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.192366  n/a   
 
 
-
 
NC_010725  Mpop_2727  transcriptional regulator, XRE family  90 
 
 		 402 bp  48.1  0.002  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_6290  transcriptional regulator, XRE family  90 
 
 		 366 bp  48.1  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>