9 homologs were found in PanDaTox collection
for query gene Smed_1193 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1193  hypothetical protein  100 
 
 
241 aa  498  1e-140  Sinorhizobium medicae WSM419  Bacteria  normal  0.226627  normal  0.38143 
 
 
-
 
NC_004310  BR0728  hypothetical protein  32.52 
 
 
298 aa  83.2  0.000000000000003  Brucella suis 1330  Bacteria  normal  0.17737  n/a   
 
 
-
 
NC_007964  Nham_2087  hypothetical protein  30.27 
 
 
240 aa  65.9  0.0000000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2539  hypothetical protein  33.33 
 
 
249 aa  56.2  0.0000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0457  hypothetical protein  31.25 
 
 
175 aa  54.3  0.000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.631295  normal 
 
 
-
 
NC_007964  Nham_2085  hypothetical protein  26.63 
 
 
218 aa  54.3  0.000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4751  hypothetical protein  30.58 
 
 
230 aa  52.4  0.000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0024  hypothetical protein  28.57 
 
 
229 aa  44.7  0.001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0378  hypothetical protein  29.46 
 
 
205 aa  42.4  0.006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
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