14 homologs were found in PanDaTox collection
for query gene Smed_0245 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_0245  hypothetical protein  100 
 
 
146 aa  296  4e-80  Sinorhizobium medicae WSM419  Bacteria  normal  0.550911  normal  0.350081 
 
 
-
 
NC_012850  Rleg_0340  hypothetical protein  65.99 
 
 
147 aa  205  2e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  decreased coverage  0.00237155 
 
 
-
 
NC_011369  Rleg2_0308  hypothetical protein  65.99 
 
 
147 aa  202  1e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0720  hypothetical protein  60.28 
 
 
147 aa  191  3e-48  Agrobacterium vitis S4  Bacteria  normal  0.616266  n/a   
 
 
-
 
NC_009668  Oant_4223  hypothetical protein  50.74 
 
 
142 aa  146  8e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0111  hypothetical protein  50.37 
 
 
145 aa  145  1.0000000000000001e-34  Brucella ovis ATCC 25840  Bacteria  normal  0.287023  n/a   
 
 
-
 
NC_004311  BRA0120  hypothetical protein  51.15 
 
 
139 aa  145  2.0000000000000003e-34  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0308  hypothetical protein  48.2 
 
 
144 aa  142  1e-33  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_1154  hypothetical protein  35.46 
 
 
160 aa  103  6e-22  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0023  hypothetical protein  35.2 
 
 
138 aa  81.3  0.000000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011757  Mchl_0647  hypothetical protein  36.97 
 
 
148 aa  78.6  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.120204 
 
 
-
 
NC_010172  Mext_0636  hypothetical protein  36.13 
 
 
148 aa  76.6  0.0000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.0349897  normal  0.38288 
 
 
-
 
NC_010725  Mpop_0615  hypothetical protein  39.6 
 
 
148 aa  75.1  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.502178 
 
 
-
 
NC_010511  M446_3218  hypothetical protein  33.65 
 
 
141 aa  67  0.00000000007  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>