270 homologs were found in PanDaTox collection
for query gene Slin_6045 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_6045  large conductance mechanosensitive channel protein  100 
 
 
163 aa  320  6e-87  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4693  large-conductance mechanosensitive channel  60.29 
 
 
138 aa  169  2e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0941617 
 
 
-
 
NC_007406  Nwi_1928  large-conductance mechanosensitive channel  58.99 
 
 
139 aa  167  4e-41  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.425698 
 
 
-
 
NC_007958  RPD_2641  large-conductance mechanosensitive channel  59.31 
 
 
143 aa  167  8e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00276841 
 
 
-
 
NC_013061  Phep_1538  large conductance mechanosensitive channel protein  60.58 
 
 
143 aa  164  5e-40  Pedobacter heparinus DSM 2366  Bacteria  normal  0.580363  normal  0.302083 
 
 
-
 
NC_010505  Mrad2831_1030  large conductance mechanosensitive channel protein  57.35 
 
 
139 aa  156  1e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.184236  normal  0.070135 
 
 
-
 
NC_009667  Oant_0410  large-conductance mechanosensitive channel  53.19 
 
 
137 aa  156  1e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0055  large conductance mechanosensitive channel protein  56.74 
 
 
140 aa  155  2e-37  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.153997 
 
 
-
 
NC_010725  Mpop_2607  large conductance mechanosensitive channel protein  53.85 
 
 
142 aa  154  3e-37  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal  0.681771 
 
 
-
 
NC_011004  Rpal_2962  large-conductance mechanosensitive channel  53.68 
 
 
159 aa  154  4e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2630  large conductance mechanosensitive channel protein  58.09 
 
 
138 aa  154  7e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.425108  normal  0.108359 
 
 
-
 
NC_007973  Rmet_3231  large-conductance mechanosensitive channel  60.69 
 
 
144 aa  153  1e-36  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0089  large conductance mechanosensitive channel protein  57.35 
 
 
142 aa  153  1e-36  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0318  large-conductance mechanosensitive channel  51.41 
 
 
138 aa  151  5e-36  Brucella suis 1330  Bacteria  normal  0.384644  n/a   
 
 
-
 
NC_007778  RPB_2603  large-conductance mechanosensitive channel  54.79 
 
 
143 aa  151  5e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.240683  normal 
 
 
-
 
NC_010172  Mext_2579  large conductance mechanosensitive channel protein  53.96 
 
 
141 aa  150  5.9999999999999996e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2802  large conductance mechanosensitive channel protein  53.96 
 
 
141 aa  150  5.9999999999999996e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.21352  normal 
 
 
-
 
NC_009505  BOV_0334  large-conductance mechanosensitive channel  50.7 
 
 
138 aa  150  8e-36  Brucella ovis ATCC 25840  Bacteria  normal  0.0803754  n/a   
 
 
-
 
NC_007964  Nham_2261  large-conductance mechanosensitive channel  57.35 
 
 
139 aa  149  1e-35  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2930  large-conductance mechanosensitive channel  56.85 
 
 
141 aa  149  2e-35  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0253  large-conductance mechanosensitive channel  57.14 
 
 
145 aa  149  2e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.410741  normal 
 
 
-
 
NC_007298  Daro_3333  large-conductance mechanosensitive channel  59.12 
 
 
141 aa  149  2e-35  Dechloromonas aromatica RCB  Bacteria  normal  0.662595  hitchhiker  0.000286923 
 
 
-
 
NC_010682  Rpic_3207  large-conductance mechanosensitive channel  56.74 
 
 
142 aa  147  5e-35  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0820  large-conductance mechanosensitive channel  57.55 
 
 
151 aa  147  6e-35  Polaromonas sp. JS666  Bacteria  normal  0.577469  normal 
 
 
-
 
NC_007347  Reut_A3094  large-conductance mechanosensitive channel  62.59 
 
 
144 aa  146  9e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.350384  n/a   
 
 
-
 
NC_010002  Daci_5504  large-conductance mechanosensitive channel  58.27 
 
 
142 aa  146  1.0000000000000001e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.215904 
 
 
-
 
NC_008825  Mpe_A0848  large-conductance mechanosensitive channel  61.31 
 
 
137 aa  146  1.0000000000000001e-34  Methylibium petroleiphilum PM1  Bacteria  normal  0.231503  normal  0.69291 
 
 
-
 
NC_008781  Pnap_0712  large-conductance mechanosensitive channel  57.55 
 
 
142 aa  145  2.0000000000000003e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.23692 
 
 
-
 
NC_008783  BARBAKC583_0292  large-conductance mechanosensitive channel  50 
 
 
138 aa  145  2.0000000000000003e-34  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3652  large-conductance mechanosensitive channel  55.15 
 
 
134 aa  144  6e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  0.326365 
 
 
-
 
NC_012856  Rpic12D_2860  large-conductance mechanosensitive channel  55.32 
 
 
142 aa  143  8.000000000000001e-34  Ralstonia pickettii 12D  Bacteria  normal  normal  0.219386 
 
 
-
 
NC_010581  Bind_3208  large conductance mechanosensitive channel protein  49.65 
 
 
141 aa  143  8.000000000000001e-34  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.0654251  normal  0.948556 
 
 
-
 
NC_012791  Vapar_1187  large conductance mechanosensitive channel protein  58.27 
 
 
143 aa  142  3e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0166  large-conductance mechanosensitive channel  58.57 
 
 
142 aa  140  6e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.3696  normal  0.313526 
 
 
-
 
NC_004578  PSPTO_4641  large conductance mechanosensitive channel protein  52.03 
 
 
148 aa  140  7e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3672  large conductance mechanosensitive channel protein  61.76 
 
 
140 aa  140  7e-33  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2963  large conductance mechanosensitive channel protein  55.8 
 
 
142 aa  140  7e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.232112  n/a   
 
 
-
 
NC_007005  Psyr_4276  large-conductance mechanosensitive channel  52.03 
 
 
148 aa  140  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.348387  normal 
 
 
-
 
NC_011369  Rleg2_0225  large-conductance mechanosensitive channel  55.48 
 
 
145 aa  140  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3746  large conductance mechanosensitive channel protein  61.76 
 
 
140 aa  140  9.999999999999999e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2265  large conductance mechanosensitive channel protein  53.15 
 
 
145 aa  139  1.9999999999999998e-32  Paracoccus denitrificans PD1222  Bacteria  normal  0.898824  normal  0.534464 
 
 
-
 
NC_009436  Ent638_3722  large-conductance mechanosensitive channel  52.48 
 
 
137 aa  138  3e-32  Enterobacter sp. 638  Bacteria  normal  0.459106  hitchhiker  0.00604869 
 
 
-
 
NC_008752  Aave_3697  large-conductance mechanosensitive channel  59.42 
 
 
143 aa  137  4.999999999999999e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  0.93238  normal  0.982216 
 
 
-
 
NC_011989  Avi_0622  large conductance mechanosensitive channel protein  57.25 
 
 
144 aa  136  1e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_41090  large-conductance mechanosensitive channel  51.47 
 
 
136 aa  135  2e-31  Azotobacter vinelandii DJ  Bacteria  normal  0.629414  n/a   
 
 
-
 
NC_011992  Dtpsy_0751  large-conductance mechanosensitive channel  56.93 
 
 
142 aa  135  2e-31  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0788  large-conductance mechanosensitive channel  56.93 
 
 
142 aa  135  2e-31  Acidovorax sp. JS42  Bacteria  normal  normal  0.112062 
 
 
-
 
NC_009438  Sputcn32_3339  large-conductance mechanosensitive channel  51.77 
 
 
136 aa  135  3.0000000000000003e-31  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0941  large conductance mechanosensitive channel protein  54.01 
 
 
137 aa  134  5e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.954406  normal 
 
 
-
 
NC_007492  Pfl01_4887  large-conductance mechanosensitive channel  50.34 
 
 
154 aa  134  5e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2428  large conductance mechanosensitive channel protein  57.25 
 
 
142 aa  134  5e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1671  large conductance mechanosensitive channel protein  46.45 
 
 
150 aa  134  6.0000000000000005e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0394869  n/a   
 
 
-
 
NC_012880  Dd703_0435  large conductance mechanosensitive channel protein  50.74 
 
 
135 aa  134  7.000000000000001e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1501  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  0.917907  n/a   
 
 
-
 
NC_010524  Lcho_0929  large-conductance mechanosensitive channel  54.35 
 
 
140 aa  133  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007434  BURPS1710b_2521  large-conductance mechanosensitive channel  53.15 
 
 
199 aa  133  9.999999999999999e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  0.334793  n/a   
 
 
-
 
NC_007493  RSP_0724  large-conductance mechanosensitive channel  51.77 
 
 
146 aa  133  9.999999999999999e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2079  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia thailandensis E264  Bacteria  normal  0.449669  n/a   
 
 
-
 
NC_008321  Shewmr4_0521  large-conductance mechanosensitive channel  50.35 
 
 
136 aa  132  9.999999999999999e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3511  large-conductance mechanosensitive channel  50.35 
 
 
136 aa  132  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4639  large-conductance mechanosensitive channel  49.66 
 
 
139 aa  133  9.999999999999999e-31  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2000  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3310  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.00104042  n/a   
 
 
-
 
NC_009049  Rsph17029_2379  large-conductance mechanosensitive channel  51.77 
 
 
146 aa  132  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.567154 
 
 
-
 
NC_009074  BURPS668_2373  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.140991  n/a   
 
 
-
 
NC_009076  BURPS1106A_2415  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  0.258205  n/a   
 
 
-
 
NC_009080  BMA10247_1272  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  132  9.999999999999999e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  0.404097  n/a   
 
 
-
 
CP001509  ECD_03141  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0423  large conductance mechanosensitive channel protein  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4645  large-conductance mechanosensitive channel  48.97 
 
 
139 aa  132  1.9999999999999998e-30  Pseudomonas putida KT2440  Bacteria  normal  normal  0.51742 
 
 
-
 
NC_010498  EcSMS35_3586  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli SMS-3-5  Bacteria  normal  0.515412  normal  0.131611 
 
 
-
 
NC_010468  EcolC_0423  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli ATCC 8739  Bacteria  normal  0.465174  hitchhiker  0.0000168159 
 
 
-
 
NC_012912  Dd1591_0352  large conductance mechanosensitive channel protein  50 
 
 
141 aa  132  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  normal  0.559193  n/a   
 
 
-
 
NC_012892  B21_03092  hypothetical protein  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3774  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli E24377A  Bacteria  normal  0.0382022  n/a   
 
 
-
 
NC_011353  ECH74115_4613  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000924287  normal 
 
 
-
 
NC_008577  Shewana3_0520  large-conductance mechanosensitive channel  49.65 
 
 
136 aa  132  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3484  large-conductance mechanosensitive channel  53.19 
 
 
136 aa  132  1.9999999999999998e-30  Escherichia coli HS  Bacteria  normal  0.175922  n/a   
 
 
-
 
NC_009656  PSPA7_5255  large-conductance mechanosensitive channel  48.94 
 
 
137 aa  132  3e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.861371  n/a   
 
 
-
 
NC_010508  Bcenmc03_1975  large-conductance mechanosensitive channel  53.85 
 
 
143 aa  131  3e-30  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0443039 
 
 
-
 
NC_012917  PC1_3793  large-conductance mechanosensitive channel  52.17 
 
 
137 aa  132  3e-30  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.832034  n/a   
 
 
-
 
NC_008062  Bcen_6128  large-conductance mechanosensitive channel  53.85 
 
 
143 aa  131  3e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.316261  n/a   
 
 
-
 
NC_008463  PA14_61050  large-conductance mechanosensitive channel  48.94 
 
 
137 aa  131  3e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1951  large-conductance mechanosensitive channel  53.85 
 
 
143 aa  131  3e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1961  mechanosensitive channel  55.88 
 
 
141 aa  131  3.9999999999999996e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.171648 
 
 
-
 
NC_013411  GYMC61_2162  large-conductance mechanosensitive channel  50.71 
 
 
126 aa  131  5e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU2794  large-conductance mechanosensitive channel  57.14 
 
 
143 aa  130  6e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5262  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  130  6.999999999999999e-30  Burkholderia sp. 383  Bacteria  normal  0.0455479  normal  0.24364 
 
 
-
 
NC_010658  SbBS512_E3677  large-conductance mechanosensitive channel  52.48 
 
 
136 aa  130  6.999999999999999e-30  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1865  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  130  6.999999999999999e-30  Burkholderia ambifaria MC40-6  Bacteria  normal  0.568071  hitchhiker  0.00372648 
 
 
-
 
NC_008390  Bamb_1938  large-conductance mechanosensitive channel  53.15 
 
 
143 aa  130  6.999999999999999e-30  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2455  large-conductance mechanosensitive channel  56.62 
 
 
141 aa  130  7.999999999999999e-30  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4507  large-conductance mechanosensitive channel  48.28 
 
 
139 aa  130  9e-30  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3971  large-conductance mechanosensitive channel  49.65 
 
 
136 aa  129  1.0000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3789  large-conductance mechanosensitive channel  49.65 
 
 
136 aa  129  1.0000000000000001e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0554  large-conductance mechanosensitive channel  51.06 
 
 
136 aa  130  1.0000000000000001e-29  Vibrio cholerae O395  Bacteria  hitchhiker  0.000110723  n/a   
 
 
-
 
NC_009665  Shew185_3845  large-conductance mechanosensitive channel  49.65 
 
 
136 aa  129  1.0000000000000001e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3972  large-conductance mechanosensitive channel  51.45 
 
 
137 aa  129  1.0000000000000001e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0532201  n/a   
 
 
-
 
NC_009052  Sbal_0480  large-conductance mechanosensitive channel  49.65 
 
 
136 aa  129  1.0000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1285  large-conductance mechanosensitive channel  50.71 
 
 
131 aa  129  2.0000000000000002e-29  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000347005  n/a   
 
 
-
 
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