10 homologs were found in PanDaTox collection
for query gene Slin_5493 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_5493  hypothetical protein  100 
 
 
432 aa  898    Spirosoma linguale DSM 74  Bacteria  normal  0.451646  normal 
 
 
-
 
NC_013037  Dfer_3663  LVIVD repeat protein  56.36 
 
 
385 aa  464  1e-129  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.022114  normal  0.127697 
 
 
-
 
NC_014230  CA2559_00705  hypothetical protein  37.97 
 
 
408 aa  270  2.9999999999999997e-71  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0082  LVIVD repeat protein  40.45 
 
 
256 aa  180  4e-44  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.541693 
 
 
-
 
NC_013037  Dfer_0081  LVIVD repeat protein  45.95 
 
 
179 aa  103  5e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.372363 
 
 
-
 
NC_013132  Cpin_6446  hypothetical protein  22.04 
 
 
403 aa  83.2  0.000000000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0788  LVIVD repeat-containing protein  23.15 
 
 
645 aa  58.5  0.0000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0658316  n/a   
 
 
-
 
NC_010524  Lcho_3739  outer membrane adhesin like proteiin  29.25 
 
 
4231 aa  50.1  0.00008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007355  Mbar_A3399  hypothetical protein  28.95 
 
 
2096 aa  48.1  0.0003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.664853  normal  0.744074 
 
 
-
 
NC_008576  Mmc1_1094  putative outer membrane adhesin like proteiin  20.38 
 
 
11716 aa  45.1  0.003  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.511917 
 
 
-
 
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