16 homologs were found in PanDaTox collection
for query gene Slin_4317 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_4317  hypothetical protein  100 
 
 
620 aa  1278    Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0690853 
 
 
-
 
NC_013037  Dfer_1570  hypothetical protein  51.74 
 
 
632 aa  627  1e-178  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.475185  normal  0.622551 
 
 
-
 
NC_013739  Cwoe_3062  hypothetical protein  25 
 
 
711 aa  112  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.0227805  normal 
 
 
-
 
NC_009012  Cthe_0624  glycoside hydrolase family protein  25.19 
 
 
1601 aa  100  1e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0097  beta-mannanase/endoglucanase A  23.5 
 
 
563 aa  96.3  2e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0700472  n/a   
 
 
-
 
NC_011898  Ccel_0429  PKD domain containing protein  22.54 
 
 
861 aa  89.4  2e-16  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4304  hypothetical protein  24 
 
 
920 aa  85.1  0.000000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.126578  normal 
 
 
-
 
NC_012034  Athe_1859  glycoside hydrolase family 5  22.66 
 
 
1294 aa  78.2  0.0000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1503  hypothetical protein  22.42 
 
 
761 aa  74.3  0.000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.562727 
 
 
-
 
NC_013730  Slin_1764  hypothetical protein  39.56 
 
 
1079 aa  50.1  0.0001  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00516909  normal 
 
 
-
 
NC_008255  CHU_2042  CHU large protein, xylanase, CBM9 module, glycoside hydrolase family 5 protein  32.63 
 
 
1217 aa  47.4  0.0008  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2041  polyfunctional acetylxylan esterase/b-xylosidase/a-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein  32.63 
 
 
1585 aa  46.2  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3146  FG-GAP repeat protein  37.5 
 
 
1337 aa  46.2  0.002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_13363  cell wall surface anchor family protein  27.17 
 
 
416 aa  45.1  0.004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.259442  n/a   
 
 
-
 
NC_008255  CHU_2044  beta-xylosidase/alpha-L-arabinofuranosidase- like protein  31.58 
 
 
1474 aa  44.3  0.007  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2248  hypothetical protein  31.76 
 
 
549 aa  43.9  0.01  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
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