8 homologs were found in PanDaTox collection
for query gene Slin_3311 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_3311  PKD domain containing protein  100 
 
 
111 aa  226  1e-58  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2966  PKD domain containing protein  31.63 
 
 
531 aa  45.4  0.0002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.506413 
 
 
-
 
NC_002939  GSU2887  cytochrome c family protein  36.67 
 
 
884 aa  42.4  0.002  Geobacter sulfurreducens PCA  Bacteria  normal  0.0141387  n/a   
 
 
-
 
NC_013510  Tcur_1015  PKD domain containing protein  32.88 
 
 
943 aa  42  0.003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3744  peptidase M6, immune inhibitor A  29.21 
 
 
951 aa  40.8  0.007  Shewanella loihica PV-4  Bacteria  unclonable  0.000497616  decreased coverage  0.0000986058 
 
 
-
 
NC_013739  Cwoe_2716  PKD domain containing protein  38.46 
 
 
664 aa  40.4  0.008  Conexibacter woesei DSM 14684  Bacteria  normal  0.575961  normal  0.0544825 
 
 
-
 
NC_013456  VEA_003663  microbial collagenase secreted  33.82 
 
 
814 aa  40.4  0.009  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0127  PKD domain containing protein  36.84 
 
 
931 aa  40  0.01  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00188311 
 
 
-
 
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