More than 300 homologs were found in PanDaTox collection
for query gene Sked_36670 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_36670  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  100 
 
 
252 aa  497  1e-140  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3510  short-chain dehydrogenase/reductase SDR  61.45 
 
 
251 aa  287  1e-76  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.439576 
 
 
-
 
NC_008254  Meso_2224  short-chain dehydrogenase/reductase SDR  55.95 
 
 
251 aa  276  3e-73  Chelativorans sp. BNC1  Bacteria  normal  0.475602  n/a   
 
 
-
 
NC_013169  Ksed_19760  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  54.25 
 
 
256 aa  250  1e-65  Kytococcus sedentarius DSM 20547  Bacteria  decreased coverage  0.000927245  normal  0.0200652 
 
 
-
 
NC_008686  Pden_2377  short-chain dehydrogenase/reductase SDR  55.2 
 
 
249 aa  243  1.9999999999999999e-63  Paracoccus denitrificans PD1222  Bacteria  normal  0.496864  normal  0.812615 
 
 
-
 
NC_009972  Haur_2059  short-chain dehydrogenase/reductase SDR  50.4 
 
 
252 aa  237  2e-61  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1274  short-chain dehydrogenase/reductase SDR  49.8 
 
 
251 aa  236  2e-61  Sinorhizobium medicae WSM419  Bacteria  normal  0.062755  normal 
 
 
-
 
NC_007973  Rmet_1335  short-chain dehydrogenase/reductase SDR  52.03 
 
 
262 aa  232  5e-60  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00696289  normal  0.955731 
 
 
-
 
NC_009441  Fjoh_0075  short-chain dehydrogenase/reductase SDR  47.56 
 
 
250 aa  228  5e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_3452  short-chain dehydrogenase/reductase SDR  51.01 
 
 
250 aa  220  9.999999999999999e-57  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.759326 
 
 
-
 
NC_013131  Caci_1326  short-chain dehydrogenase/reductase SDR  51.78 
 
 
282 aa  212  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.603187  normal 
 
 
-
 
NC_011071  Smal_2364  short-chain dehydrogenase/reductase SDR  47.39 
 
 
252 aa  211  7.999999999999999e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.927467  normal 
 
 
-
 
NC_013730  Slin_3152  short-chain dehydrogenase/reductase SDR  44.49 
 
 
250 aa  208  7e-53  Spirosoma linguale DSM 74  Bacteria  normal  0.182399  normal 
 
 
-
 
NC_009921  Franean1_0924  short-chain dehydrogenase/reductase SDR  52 
 
 
321 aa  207  9e-53  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00780913  normal  0.965318 
 
 
-
 
NC_009654  Mmwyl1_2434  short-chain dehydrogenase/reductase SDR  44.44 
 
 
252 aa  204  1e-51  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000391653  normal  0.106705 
 
 
-
 
NC_013744  Htur_3801  short-chain dehydrogenase/reductase SDR  45.9 
 
 
251 aa  197  1.0000000000000001e-49  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00700482  n/a   
 
 
-
 
NC_007777  Francci3_3801  short-chain dehydrogenase/reductase SDR  47.98 
 
 
277 aa  195  6e-49  Frankia sp. CcI3  Bacteria  normal  0.0429275  normal 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  47.56 
 
 
250 aa  188  8e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007509  Bcep18194_C7039  Short-chain dehydrogenase/reductase SDR  42.34 
 
 
258 aa  187  9e-47  Burkholderia sp. 383  Bacteria  normal  normal  0.607221 
 
 
-
 
NC_008392  Bamb_6220  short-chain dehydrogenase/reductase SDR  41.77 
 
 
252 aa  186  3e-46  Burkholderia ambifaria AMMD  Bacteria  normal  0.621886  normal 
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  41.7 
 
 
249 aa  183  2.0000000000000003e-45  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B5463  Short-chain dehydrogenase/reductase SDR  41.83 
 
 
251 aa  182  3e-45  Ralstonia eutropha JMP134  Bacteria  normal  0.230582  n/a   
 
 
-
 
NC_013922  Nmag_0509  short-chain dehydrogenase/reductase SDR  44.7 
 
 
265 aa  183  3e-45  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009719  Plav_2627  short-chain dehydrogenase/reductase SDR  41.35 
 
 
268 aa  182  6e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.335809  normal  0.150749 
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  45.6 
 
 
246 aa  181  1e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  40.93 
 
 
258 aa  180  2e-44  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  42.52 
 
 
256 aa  179  2.9999999999999997e-44  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  42.4 
 
 
257 aa  179  4.999999999999999e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  39.68 
 
 
256 aa  179  4.999999999999999e-44  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_010172  Mext_1352  short-chain dehydrogenase/reductase SDR  41.94 
 
 
282 aa  177  1e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.316546  normal  0.241504 
 
 
-
 
NC_008697  Noca_4814  short-chain dehydrogenase/reductase SDR  43.53 
 
 
257 aa  177  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.19857  normal 
 
 
-
 
NC_007355  Mbar_A0777  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase  40.56 
 
 
256 aa  176  2e-43  Methanosarcina barkeri str. Fusaro  Archaea  normal  unclonable  0.000000000602932 
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  41.53 
 
 
248 aa  177  2e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_013744  Htur_3816  short-chain dehydrogenase/reductase SDR  41.43 
 
 
253 aa  176  4e-43  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.840312  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  40.23 
 
 
250 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008392  Bamb_6225  short-chain dehydrogenase/reductase SDR  41.6 
 
 
252 aa  176  5e-43  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1315  short-chain dehydrogenase/reductase SDR  39.68 
 
 
258 aa  175  6e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6514  short-chain dehydrogenase/reductase SDR  39.68 
 
 
258 aa  175  6e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6104  short-chain dehydrogenase/reductase SDR  39.27 
 
 
258 aa  175  6e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.500717  normal 
 
 
-
 
NC_011886  Achl_1767  short-chain dehydrogenase/reductase SDR  45.38 
 
 
246 aa  174  9.999999999999999e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000018635 
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  42.34 
 
 
258 aa  173  1.9999999999999998e-42  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2914  short chain dehydrogenase  39.13 
 
 
255 aa  173  1.9999999999999998e-42  Trichodesmium erythraeum IMS101  Bacteria  normal  0.892644  normal  0.135282 
 
 
-
 
NC_011071  Smal_2771  short chain dehydrogenase  39.52 
 
 
253 aa  172  2.9999999999999996e-42  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3542  short-chain dehydrogenase/reductase SDR  45.16 
 
 
258 aa  172  2.9999999999999996e-42  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1659  short-chain dehydrogenase/reductase SDR  41.11 
 
 
251 aa  173  2.9999999999999996e-42  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  43.15 
 
 
246 aa  172  3.9999999999999995e-42  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  40.71 
 
 
253 aa  171  6.999999999999999e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_011830  Dhaf_2647  3-ketoacyl-(acyl-carrier-protein) reductase  39.3 
 
 
252 aa  171  7.999999999999999e-42  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000389723  n/a   
 
 
-
 
NC_013526  Tter_2773  short-chain dehydrogenase/reductase SDR  41.37 
 
 
253 aa  171  9e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1122  short chain dehydrogenase/reductase family oxidoreductase  43.15 
 
 
246 aa  171  1e-41  Brucella suis 1330  Bacteria  normal  0.0726405  n/a   
 
 
-
 
NC_009051  Memar_0925  3-ketoacyl-(acyl-carrier-protein) reductase  40.8 
 
 
251 aa  171  1e-41  Methanoculleus marisnigri JR1  Archaea  normal  0.568448  n/a   
 
 
-
 
NC_009338  Mflv_3281  short-chain dehydrogenase/reductase SDR  41.7 
 
 
248 aa  169  6e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.846295 
 
 
-
 
NC_007511  Bcep18194_B0533  short chain dehydrogenase  41.73 
 
 
257 aa  168  8e-41  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3000  short-chain dehydrogenase/reductase SDR  40.89 
 
 
248 aa  168  8e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.767749  normal  0.280666 
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  40.62 
 
 
248 aa  168  9e-41  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3726  short-chain dehydrogenase/reductase SDR  42.19 
 
 
252 aa  168  9e-41  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1760  short-chain dehydrogenase/reductase SDR  40.96 
 
 
255 aa  167  1e-40  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.233538  normal 
 
 
-
 
NC_002947  PP_1946  short chain dehydrogenase/reductase family oxidoreductase  40.24 
 
 
262 aa  166  2e-40  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000538802 
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  40.82 
 
 
252 aa  166  2e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_008148  Rxyl_0541  short-chain dehydrogenase/reductase SDR  38.65 
 
 
251 aa  167  2e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2507  short-chain dehydrogenase/reductase SDR  41.37 
 
 
253 aa  167  2e-40  Nocardioides sp. JS614  Bacteria  normal  0.024976  n/a   
 
 
-
 
NC_011892  Mnod_8330  short-chain dehydrogenase/reductase SDR  41.37 
 
 
255 aa  166  2.9999999999999998e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2508  short-chain dehydrogenase/reductase SDR  40 
 
 
250 aa  166  4e-40  Nocardioides sp. JS614  Bacteria  normal  0.168106  n/a   
 
 
-
 
NC_007511  Bcep18194_B2225  Short-chain dehydrogenase/reductase SDR  41.06 
 
 
267 aa  165  5.9999999999999996e-40  Burkholderia sp. 383  Bacteria  normal  normal  0.801106 
 
 
-
 
NC_008228  Patl_2719  short-chain dehydrogenase/reductase SDR  37.27 
 
 
280 aa  165  6.9999999999999995e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.708737  n/a   
 
 
-
 
NC_013158  Huta_2979  short-chain dehydrogenase/reductase SDR  40.62 
 
 
255 aa  164  1.0000000000000001e-39  Halorhabdus utahensis DSM 12940  Archaea  normal  0.259784  n/a   
 
 
-
 
NC_013743  Htur_0514  short-chain dehydrogenase/reductase SDR  38.89 
 
 
252 aa  164  1.0000000000000001e-39  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0643  short-chain dehydrogenase/reductase SDR  40.32 
 
 
271 aa  164  1.0000000000000001e-39  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.224446 
 
 
-
 
NC_010002  Daci_4456  short chain dehydrogenase  40.64 
 
 
258 aa  164  1.0000000000000001e-39  Delftia acidovorans SPH-1  Bacteria  normal  0.968852  decreased coverage  0.00124263 
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  39.52 
 
 
253 aa  164  2.0000000000000002e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_011831  Cagg_0630  3-oxoacyl-(acyl-carrier-protein) reductase  40.82 
 
 
246 aa  163  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  41.13 
 
 
247 aa  163  2.0000000000000002e-39  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_010622  Bphy_2616  short chain dehydrogenase  40.47 
 
 
258 aa  163  2.0000000000000002e-39  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2067  short-chain dehydrogenase/reductase SDR  36.59 
 
 
253 aa  164  2.0000000000000002e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3260  short-chain dehydrogenase/reductase SDR  40.16 
 
 
255 aa  164  2.0000000000000002e-39  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.00276657  normal  0.102342 
 
 
-
 
NC_009972  Haur_1658  short-chain dehydrogenase/reductase SDR  39.92 
 
 
247 aa  163  2.0000000000000002e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  40.56 
 
 
247 aa  163  3e-39  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_009052  Sbal_3471  short chain dehydrogenase  41.39 
 
 
254 aa  162  4.0000000000000004e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0926  short-chain dehydrogenase/reductase SDR  40.32 
 
 
249 aa  162  4.0000000000000004e-39  Methanoculleus marisnigri JR1  Archaea  normal  0.598625  n/a   
 
 
-
 
NC_012912  Dd1591_2736  short-chain dehydrogenase/reductase SDR  40.16 
 
 
255 aa  162  4.0000000000000004e-39  Dickeya zeae Ech1591  Bacteria  normal  0.777047  n/a   
 
 
-
 
NC_011729  PCC7424_4469  short-chain dehydrogenase/reductase SDR  38.34 
 
 
293 aa  162  4.0000000000000004e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011663  Sbal223_0890  short chain dehydrogenase  41.39 
 
 
254 aa  162  5.0000000000000005e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1334  short-chain dehydrogenase/reductase SDR  41.37 
 
 
254 aa  162  5.0000000000000005e-39  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3851  short-chain dehydrogenase/reductase SDR  40.8 
 
 
256 aa  162  6e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.575902  normal  0.466968 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  36.08 
 
 
256 aa  162  6e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_013595  Sros_4258  short-chain dehydrogenase/reductase SDR  41.27 
 
 
253 aa  162  7e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  0.414505 
 
 
-
 
NC_009665  Shew185_0865  short chain dehydrogenase  41.39 
 
 
254 aa  162  7e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1963  short-chain dehydrogenase/reductase SDR  40.24 
 
 
257 aa  162  7e-39  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.922459 
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  42.11 
 
 
251 aa  161  8.000000000000001e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5464  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  39.76 
 
 
253 aa  161  9e-39  Ralstonia eutropha JMP134  Bacteria  normal  0.852927  n/a   
 
 
-
 
NC_008781  Pnap_2307  3-oxoacyl-(acyl-carrier-protein) reductase  37.65 
 
 
247 aa  161  9e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  41.13 
 
 
254 aa  161  1e-38  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  40.73 
 
 
255 aa  161  1e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_009427  Saro_3544  short-chain dehydrogenase/reductase SDR  34.31 
 
 
271 aa  161  1e-38  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1005  short-chain dehydrogenase/reductase SDR  36 
 
 
260 aa  160  1e-38  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000302146 
 
 
-
 
NC_011832  Mpal_1402  short-chain dehydrogenase/reductase SDR  40.32 
 
 
249 aa  161  1e-38  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013744  Htur_3817  short-chain dehydrogenase/reductase SDR  40.65 
 
 
252 aa  160  2e-38  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.191751  n/a   
 
 
-
 
NC_008148  Rxyl_3011  short-chain dehydrogenase/reductase SDR  39.46 
 
 
251 aa  160  2e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17790  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  38.58 
 
 
288 aa  159  3e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.40467 
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  35.41 
 
 
256 aa  159  4e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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