6 homologs were found in PanDaTox collection
for query gene Sked_28540 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_28540  hypothetical protein  100 
 
 
739 aa  1434    Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00808875  normal  0.0849001 
 
 
-
 
NC_009921  Franean1_7282  hypothetical protein  30.5 
 
 
867 aa  185  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  0.827215  normal  0.313024 
 
 
-
 
NC_012560  Avin_51180  Secreted mannuronan C-5 epimerase  27.85 
 
 
998 aa  48.5  0.0005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3733  hypothetical protein  27.47 
 
 
1439 aa  47  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00226773 
 
 
-
 
NC_011832  Mpal_1833  periplasmic copper-binding  27.45 
 
 
595 aa  45.4  0.003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.107364 
 
 
-
 
NC_012560  Avin_51190  Secreted mannuronan C-5 epimerase  26.36 
 
 
1403 aa  43.9  0.01  Azotobacter vinelandii DJ  Bacteria  normal  0.156968  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>