5 homologs were found in PanDaTox collection
for query gene Sked_17830 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_17830  Fimbrial assembly protein (PilN)  100 
 
 
231 aa  459  9.999999999999999e-129  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.202295  normal  0.403807 
 
 
-
 
NC_013174  Jden_1338  hypothetical protein  32.59 
 
 
242 aa  111  8.000000000000001e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1831  Fimbrial assembly family protein  37.25 
 
 
235 aa  99.4  4e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.208749  normal  0.327903 
 
 
-
 
NC_009664  Krad_3018  Fimbrial assembly family protein  30.21 
 
 
217 aa  72.8  0.000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.12821 
 
 
-
 
NC_008578  Acel_1312  fimbrial assembly family protein  29.45 
 
 
221 aa  49.3  0.00006  Acidothermus cellulolyticus 11B  Bacteria  normal  0.714725  decreased coverage  0.0049251 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>