More than 300 homologs were found in PanDaTox collection
for query gene Sked_06270 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_06270  drug resistance transporter, EmrB/QacA subfamily  100 
 
 
490 aa  935    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2424  drug resistance transporter, EmrB/QacA subfamily  62.71 
 
 
496 aa  553  1e-156  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.153591 
 
 
-
 
NC_009664  Krad_0268  drug resistance transporter, EmrB/QacA subfamily  62.1 
 
 
500 aa  522  1e-147  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0312698  decreased coverage  0.00157172 
 
 
-
 
NC_012669  Bcav_0845  drug resistance transporter, EmrB/QacA subfamily  57.32 
 
 
489 aa  476  1e-133  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.222515  normal  0.167552 
 
 
-
 
NC_008541  Arth_0161  EmrB/QacA family drug resistance transporter  55.6 
 
 
494 aa  461  9.999999999999999e-129  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1298  drug resistance transporter, EmrB/QacA subfamily  59.28 
 
 
500 aa  455  1e-127  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.000893352  hitchhiker  0.00471574 
 
 
-
 
NC_011886  Achl_0326  drug resistance transporter, EmrB/QacA subfamily  52.42 
 
 
490 aa  454  1.0000000000000001e-126  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_3361  drug resistance transporter, EmrB/QacA subfamily  54.05 
 
 
492 aa  446  1.0000000000000001e-124  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30030  drug resistance transporter, EmrB/QacA subfamily  52.07 
 
 
487 aa  434  1e-120  Saccharomonospora viridis DSM 43017  Bacteria  decreased coverage  0.00171806  normal 
 
 
-
 
NC_013172  Bfae_02600  drug resistance transporter, EmrB/QacA subfamily  52.64 
 
 
505 aa  429  1e-119  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05820  drug resistance transporter, EmrB/QacA subfamily  48.85 
 
 
510 aa  421  1e-116  Brachybacterium faecium DSM 4810  Bacteria  normal  0.835158  n/a   
 
 
-
 
NC_009972  Haur_1459  EmrB/QacA family drug resistance transporter  51.51 
 
 
483 aa  416  9.999999999999999e-116  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.257317  n/a   
 
 
-
 
NC_013947  Snas_5520  drug resistance transporter, EmrB/QacA subfamily  52.08 
 
 
502 aa  412  1e-114  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_14700  drug resistance transporter, EmrB/QacA subfamily  51.23 
 
 
491 aa  394  1e-108  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0438074  normal  0.116411 
 
 
-
 
NC_014158  Tpau_3099  drug resistance transporter, EmrB/QacA subfamily  47.12 
 
 
491 aa  384  1e-105  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1003  lincomycin resistance protein LmrB  40.58 
 
 
480 aa  362  9e-99  Bacillus cereus AH187  Bacteria  normal  0.2001  n/a   
 
 
-
 
NC_006274  BCZK0734  lincomycin resistance protein  40.58 
 
 
480 aa  362  1e-98  Bacillus cereus E33L  Bacteria  normal  0.498733  n/a   
 
 
-
 
NC_005957  BT9727_0959  permease, general substrate transporter  42.77 
 
 
482 aa  358  9.999999999999999e-98  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0281229  n/a   
 
 
-
 
NC_005945  BAS0971  EmrB/QacA family drug resistance transporter  42.42 
 
 
482 aa  355  7.999999999999999e-97  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1038  EmrB/QacA family drug resistance transporter  42.42 
 
 
482 aa  355  7.999999999999999e-97  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0949  permease, general substrate transporter  42.57 
 
 
482 aa  354  2e-96  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000025972  n/a   
 
 
-
 
NC_011773  BCAH820_1116  drug resistance transporter, EmrB/QacA family  42.36 
 
 
482 aa  352  5.9999999999999994e-96  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000271146 
 
 
-
 
NC_013205  Aaci_2428  drug resistance transporter, EmrB/QacA subfamily  39.52 
 
 
561 aa  332  1e-89  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0683901  n/a   
 
 
-
 
NC_013205  Aaci_2909  drug resistance transporter, EmrB/QacA subfamily  37.15 
 
 
635 aa  328  1.0000000000000001e-88  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000610887  n/a   
 
 
-
 
NC_009524  PsycPRwf_1468  EmrB/QacA family drug resistance transporter  38.45 
 
 
491 aa  318  2e-85  Psychrobacter sp. PRwf-1  Bacteria  normal  0.986472  normal  0.151461 
 
 
-
 
NC_011773  BCAH820_3230  drug resistance transporter, EmrB/QacA family  39.96 
 
 
492 aa  317  3e-85  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_2982  multidrug resistance protein B  39.96 
 
 
492 aa  317  3e-85  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2014  drug resistance transporter, EmrB/QacA family  40.17 
 
 
513 aa  316  5e-85  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3251  drug resistance transporter, EmrB/QacA family  40.17 
 
 
492 aa  315  9e-85  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2922  multidrug resistance protein B  39.96 
 
 
492 aa  315  9.999999999999999e-85  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3240  EmrB/QacA family drug resistance transporter  40.38 
 
 
492 aa  315  1.9999999999999998e-84  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2994  EmrB/QacA family drug resistance transporter  39.54 
 
 
492 aa  314  1.9999999999999998e-84  Bacillus anthracis str. Sterne  Bacteria  normal  0.218586  n/a   
 
 
-
 
NC_007530  GBAA_3223  EmrB/QacA family drug resistance transporter  39.54 
 
 
492 aa  314  1.9999999999999998e-84  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0356226  n/a   
 
 
-
 
NC_011725  BCB4264_A3232  drug resistance transporter, EmrB/QacA family  39.96 
 
 
513 aa  314  1.9999999999999998e-84  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1028  drug resistance transporter, EmrB/QacA family  39.09 
 
 
491 aa  313  3.9999999999999997e-84  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.10576e-22 
 
 
-
 
NC_010184  BcerKBAB4_2937  EmrB/QacA family drug resistance transporter  39.53 
 
 
492 aa  313  3.9999999999999997e-84  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.486174  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0845  EmrB/QacA family drug resistance transporter  38.16 
 
 
491 aa  312  7.999999999999999e-84  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0888  EmrB/QacA family drug resistance transporter  38.68 
 
 
486 aa  312  1e-83  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2488  EmrB/QacA family drug resistance transporter  36.95 
 
 
479 aa  311  1e-83  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0944  EmrB/QacA family drug resistance transporter  38.68 
 
 
486 aa  312  1e-83  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2440  EmrB/QacA family drug resistance transporter  36.95 
 
 
479 aa  311  1e-83  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0877  major facilitator superfamily permease  37.26 
 
 
496 aa  311  2e-83  Oenococcus oeni PSU-1  Bacteria  normal  0.192576  n/a   
 
 
-
 
NC_011658  BCAH187_A1115  drug resistance transporter, EmrB/QacA family  39.03 
 
 
491 aa  310  4e-83  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4325  drug resistance transporter, EmrB/QacA family  38.91 
 
 
491 aa  309  5.9999999999999995e-83  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0988  drug resistance transporter, EmrB/QacA family  38.2 
 
 
491 aa  309  9e-83  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3194  EmrB/QacA family drug resistance transporter  38.41 
 
 
484 aa  298  2e-79  Bacillus cereus ATCC 10987  Bacteria  normal  0.794509  n/a   
 
 
-
 
NC_013172  Bfae_22510  drug resistance transporter, EmrB/QacA subfamily  36.72 
 
 
494 aa  296  7e-79  Brachybacterium faecium DSM 4810  Bacteria  normal  0.319093  n/a   
 
 
-
 
NC_012793  GWCH70_1833  drug resistance transporter, EmrB/QacA subfamily  32.05 
 
 
564 aa  294  2e-78  Geobacillus sp. WCH70  Bacteria  normal  0.0281974  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2739  EmrB/QacA family drug resistance transporter  38.72 
 
 
482 aa  293  6e-78  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000169232  n/a   
 
 
-
 
NC_003909  BCE_4699  EmrB/QacA family drug resistance transporter  35.14 
 
 
599 aa  290  4e-77  Bacillus cereus ATCC 10987  Bacteria  normal  0.0449963  n/a   
 
 
-
 
NC_011772  BCG9842_B0561  drug resistance transporter, EmrB/QacA family  34.52 
 
 
599 aa  290  4e-77  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000151463  hitchhiker  0.00000000000000678179 
 
 
-
 
NC_009674  Bcer98_3254  EmrB/QacA family drug resistance transporter  35.68 
 
 
579 aa  289  1e-76  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2448  drug resistance transporter, EmrB/QacA subfamily  32.32 
 
 
570 aa  286  4e-76  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008531  LEUM_1863  major facilitator superfamily permease  35.7 
 
 
465 aa  286  5e-76  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0147099  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4399  EmrB/QacA family drug resistance transporter  34.15 
 
 
597 aa  283  5.000000000000001e-75  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00696651  n/a   
 
 
-
 
NC_009513  Lreu_1519  EmrB/QacA family drug resistance transporter  34.44 
 
 
502 aa  282  8.000000000000001e-75  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4676  drug resistance transporter, EmrB/QacA family  34.83 
 
 
599 aa  282  8.000000000000001e-75  Bacillus cereus B4264  Bacteria  hitchhiker  0.00195609  n/a   
 
 
-
 
NC_011658  BCAH187_A4692  drug resistance transporter, EmrB/QacA family  34.83 
 
 
599 aa  282  1e-74  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000143582  n/a   
 
 
-
 
NC_006274  BCZK4310  multidrug resistance protein B  34.83 
 
 
599 aa  282  1e-74  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4683  drug resistance transporter, EmrB/QacA family  34.83 
 
 
599 aa  281  2e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.74665e-44 
 
 
-
 
NC_005957  BT9727_4299  multidrug resistance protein B  34.83 
 
 
599 aa  281  2e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.649426  n/a   
 
 
-
 
NC_005945  BAS4464  EmrB/QacA family drug resistance transporter  34.83 
 
 
599 aa  280  3e-74  Bacillus anthracis str. Sterne  Bacteria  normal  0.737474  n/a   
 
 
-
 
NC_007530  GBAA_4812  EmrB/QacA family drug resistance transporter  34.83 
 
 
599 aa  280  3e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.127812  n/a   
 
 
-
 
NC_008530  LGAS_0725  major facilitator superfamily permease  35.2 
 
 
490 aa  278  1e-73  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal  0.29773 
 
 
-
 
NC_002976  SERP1944  EmrB/QacA family drug resistance transporter  35.34 
 
 
658 aa  277  3e-73  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2489  drug resistance transporter, EmrB/QacA subfamily  38.77 
 
 
657 aa  275  1.0000000000000001e-72  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2236  EmrB/QacA family drug resistance transporter  34.26 
 
 
481 aa  271  2.9999999999999997e-71  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.126562  n/a   
 
 
-
 
NC_009487  SaurJH9_2198  EmrB/QacA family drug resistance transporter  34.26 
 
 
481 aa  271  2.9999999999999997e-71  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0460557  n/a   
 
 
-
 
NC_009487  SaurJH9_2376  EmrB/QacA family drug resistance transporter  38.48 
 
 
643 aa  268  1e-70  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2422  EmrB/QacA family drug resistance transporter  38.48 
 
 
643 aa  268  1e-70  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.845412  n/a   
 
 
-
 
NC_002976  SERP2340  EmrB/QacA family drug resistance transporter  35.04 
 
 
472 aa  268  2e-70  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1766  EmrB/QacA family drug resistance transporter  32.4 
 
 
479 aa  266  7e-70  Staphylococcus epidermidis RP62A  Bacteria  normal  0.239731  n/a   
 
 
-
 
NC_010816  BLD_0659  permease of the major facilitator superfamily  36.73 
 
 
683 aa  261  2e-68  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1423  major facilitator superfamily permease  34.26 
 
 
464 aa  255  2.0000000000000002e-66  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.904673  hitchhiker  0.0000661431 
 
 
-
 
NC_008531  LEUM_1880  major facilitator superfamily permease  33.75 
 
 
503 aa  248  1e-64  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1707  EmrB/QacA family drug resistance transporter  34.41 
 
 
499 aa  247  4e-64  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00395265  n/a   
 
 
-
 
NC_009513  Lreu_1318  EmrB/QacA family drug resistance transporter  34.35 
 
 
465 aa  243  6e-63  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0354  drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein  34.43 
 
 
542 aa  238  2e-61  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0998  putative permease  33.89 
 
 
548 aa  236  7e-61  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11090  drug resistance transporter, EmrB/QacA subfamily  36.55 
 
 
640 aa  234  4.0000000000000004e-60  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.000431734  normal 
 
 
-
 
NC_011830  Dhaf_1686  drug resistance transporter, EmrB/QacA subfamily  32.06 
 
 
620 aa  226  5.0000000000000005e-58  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.892029  n/a   
 
 
-
 
NC_008528  OEOE_1853  major facilitator superfamily permease  31.6 
 
 
471 aa  221  1.9999999999999999e-56  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1383  major facilitator superfamily permease  30.79 
 
 
519 aa  217  2.9999999999999998e-55  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.601618  n/a   
 
 
-
 
NC_009513  Lreu_0360  major facilitator transporter  32.42 
 
 
461 aa  217  5e-55  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2667  drug resistance transporter, EmrB/QacA subfamily  30.34 
 
 
485 aa  212  1e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0905281  normal  0.424193 
 
 
-
 
NC_008528  OEOE_0290  major facilitator superfamily permease  32.44 
 
 
463 aa  204  2e-51  Oenococcus oeni PSU-1  Bacteria  normal  0.146864  n/a   
 
 
-
 
NC_008528  OEOE_1378  major facilitator superfamily permease  31.18 
 
 
512 aa  203  5e-51  Oenococcus oeni PSU-1  Bacteria  normal  0.0602023  n/a   
 
 
-
 
NC_013235  Namu_0033  drug resistance transporter, EmrB/QacA subfamily  27.99 
 
 
541 aa  201  1.9999999999999998e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08630  drug resistance transporter, EmrB/QacA subfamily  29.64 
 
 
509 aa  200  5e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.315329 
 
 
-
 
NC_009513  Lreu_1299  major facilitator transporter  30.71 
 
 
479 aa  200  6e-50  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2761  EmrB/QacA family drug resistance transporter  28.6 
 
 
545 aa  198  2.0000000000000003e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00000648651  n/a   
 
 
-
 
NC_008699  Noca_0136  EmrB/QacA family drug resistance transporter  30.38 
 
 
504 aa  197  5.000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.903569  n/a   
 
 
-
 
NC_009253  Dred_0455  EmrB/QacA family drug resistance transporter  31.49 
 
 
514 aa  196  8.000000000000001e-49  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2324  EmrB/QacA family drug resistance transporter  28.78 
 
 
534 aa  194  4e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.937948  normal 
 
 
-
 
NC_013165  Shel_27290  drug resistance transporter, EmrB/QacA subfamily  31.75 
 
 
628 aa  193  7e-48  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6823  EmrB/QacA family drug resistance transporter  32.03 
 
 
558 aa  192  1e-47  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_1471  major facilitator superfamily permease  34.18 
 
 
454 aa  191  2.9999999999999997e-47  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00462633  n/a   
 
 
-
 
NC_013510  Tcur_1972  drug resistance transporter, EmrB/QacA subfamily  30.52 
 
 
510 aa  191  2.9999999999999997e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.073103  n/a   
 
 
-
 
NC_013204  Elen_1101  major facilitator superfamily MFS_1  34.38 
 
 
469 aa  190  4e-47  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.0000859946  hitchhiker  0.0000000000000597141 
 
 
-
 
NC_014165  Tbis_3261  EmrB/QacA subfamily drug resistance transporter  32.21 
 
 
488 aa  189  1e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.27524  normal  0.337797 
 
 
-
 
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