More than 300 homologs were found in PanDaTox collection
for query gene Shewmr7_3847 on replicon NC_008322
Organism: Shewanella sp. MR-7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_4094  signal recognition particle-docking protein FtsY  70.29 
 
 
615 aa  657    Shewanella baltica OS223  Bacteria  hitchhiker  0.00000394743  normal 
 
 
-
 
NC_009665  Shew185_4164  signal recognition particle-docking protein FtsY  70.16 
 
 
611 aa  685    Shewanella baltica OS185  Bacteria  hitchhiker  0.00648424  n/a   
 
 
-
 
NC_004347  SO_4586  cell division protein FtsY  87.27 
 
 
510 aa  746    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0289  signal recognition particle-docking protein FtsY  66.44 
 
 
482 aa  661    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000644129  n/a   
 
 
-
 
NC_009997  Sbal195_4295  signal recognition particle-docking protein FtsY  70.66 
 
 
540 aa  669    Shewanella baltica OS195  Bacteria  hitchhiker  0.00341336  normal  0.0288649 
 
 
-
 
NC_009901  Spea_3980  signal recognition particle-docking protein FtsY  64.4 
 
 
643 aa  683    Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00176908  n/a   
 
 
-
 
NC_009052  Sbal_0171  signal recognition particle-docking protein FtsY  70.3 
 
 
621 aa  678    Shewanella baltica OS155  Bacteria  hitchhiker  0.000116132  n/a   
 
 
-
 
NC_010506  Swoo_0201  signal recognition particle-docking protein FtsY  64.43 
 
 
491 aa  640    Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00197589  decreased coverage  0.000000348094 
 
 
-
 
NC_008321  Shewmr4_3774  signal recognition particle-docking protein FtsY  89.95 
 
 
582 aa  762    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00390438  normal 
 
 
-
 
NC_008322  Shewmr7_3847  signal recognition particle-docking protein FtsY  100 
 
 
584 aa  1119    Shewanella sp. MR-7  Bacteria  hitchhiker  0.00993758  normal 
 
 
-
 
NC_008345  Sfri_0275  signal recognition particle-docking protein FtsY  61.34 
 
 
587 aa  647    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.125713  n/a   
 
 
-
 
NC_009092  Shew_3606  signal recognition particle-docking protein FtsY  69.18 
 
 
561 aa  678    Shewanella loihica PV-4  Bacteria  hitchhiker  0.00455766  normal 
 
 
-
 
NC_008577  Shewana3_3972  signal recognition particle-docking protein FtsY  81.77 
 
 
562 aa  805    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00124798  normal 
 
 
-
 
NC_008700  Sama_3468  cell division protein FtsY  66.33 
 
 
563 aa  651    Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.00185267  normal 
 
 
-
 
NC_007954  Sden_3505  signal recognition particle-docking protein FtsY  81.57 
 
 
487 aa  580  1e-164  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000471575  n/a   
 
 
-
 
NC_008709  Ping_0623  signal recognition particle-docking protein FtsY  62.88 
 
 
453 aa  530  1e-149  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4065  signal recognition particle-docking protein FtsY  63.79 
 
 
452 aa  523  1e-147  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0157  signal recognition particle-docking protein FtsY  60.95 
 
 
481 aa  519  1e-146  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3877  signal recognition particle-docking protein FtsY  64.03 
 
 
432 aa  515  1.0000000000000001e-145  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0099  cell division protein FtsY  77.17 
 
 
495 aa  512  1e-144  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0093  cell division protein FtsY  76.85 
 
 
471 aa  509  1e-143  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03313  fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein  62.53 
 
 
498 aa  508  9.999999999999999e-143  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0251  signal recognition particle-docking protein FtsY  62.78 
 
 
497 aa  506  9.999999999999999e-143  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3946  cell division protein FtsY  63.32 
 
 
497 aa  508  9.999999999999999e-143  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03266  hypothetical protein  62.53 
 
 
498 aa  508  9.999999999999999e-143  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3747  cell division protein FtsY  77.09 
 
 
512 aa  505  9.999999999999999e-143  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E3858  cell division protein FtsY  63.32 
 
 
497 aa  506  9.999999999999999e-143  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4784  cell division protein FtsY  62.75 
 
 
498 aa  506  9.999999999999999e-143  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3663  cell division protein FtsY  77.09 
 
 
498 aa  505  1e-141  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0252  cell division protein FtsY  77.09 
 
 
498 aa  505  1e-141  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3868  cell division protein FtsY  76.62 
 
 
511 aa  504  1e-141  Enterobacter sp. 638  Bacteria  normal  0.046763  normal  0.12131 
 
 
-
 
NC_008228  Patl_3944  signal recognition particle-docking protein FtsY  67.04 
 
 
485 aa  503  1e-141  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.0000907128  n/a   
 
 
-
 
NC_011080  SNSL254_A3840  cell division protein FtsY  77.26 
 
 
491 aa  499  1e-140  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3773  cell division protein FtsY  77.43 
 
 
491 aa  500  1e-140  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3883  cell division protein FtsY  78.78 
 
 
491 aa  498  1e-139  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.629527  normal 
 
 
-
 
NC_011094  SeSA_A3763  cell division protein FtsY  77.12 
 
 
491 aa  496  1e-139  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3942  cell division protein FtsY  76.64 
 
 
491 aa  496  1e-139  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.643003  normal 
 
 
-
 
NC_009832  Spro_0221  signal recognition particle-docking protein FtsY  76.31 
 
 
535 aa  490  1e-137  Serratia proteamaculans 568  Bacteria  normal  0.359451  normal  0.0478806 
 
 
-
 
NC_009708  YpsIP31758_0239  cell division protein FtsY  77.49 
 
 
541 aa  488  1e-136  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0752366  n/a   
 
 
-
 
NC_010465  YPK_3979  signal recognition particle-docking protein FtsY  77.17 
 
 
523 aa  485  1e-135  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2374  signal recognition particle-docking protein FtsY  74.6 
 
 
387 aa  470  1.0000000000000001e-131  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000224512  n/a   
 
 
-
 
NC_011312  VSAL_I2903  cell division protein FtsY  74.44 
 
 
410 aa  468  9.999999999999999e-131  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.297557  n/a   
 
 
-
 
NC_009783  VIBHAR_00280  signal recognition particle GTPase  73.95 
 
 
408 aa  466  9.999999999999999e-131  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_0414  signal recognition particle-docking protein FtsY  71.02 
 
 
447 aa  459  9.999999999999999e-129  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002138  signal recognition particle receptor protein FtsY  72.99 
 
 
407 aa  456  1e-127  Vibrio sp. Ex25  Bacteria  normal  0.745787  n/a   
 
 
-
 
NC_007963  Csal_2989  signal recognition particle-docking protein FtsY  67.3 
 
 
501 aa  454  1.0000000000000001e-126  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.862274  n/a   
 
 
-
 
NC_010322  PputGB1_5161  signal recognition particle-docking protein FtsY  63.22 
 
 
510 aa  441  9.999999999999999e-123  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5111  signal recognition particle-docking protein FtsY  67.96 
 
 
494 aa  434  1e-120  Pseudomonas putida KT2440  Bacteria  normal  0.489493  normal 
 
 
-
 
NC_009512  Pput_4984  signal recognition particle-docking protein FtsY  67.96 
 
 
497 aa  434  1e-120  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4751  cell division transporter substrate-binding protein FtsY  66.99 
 
 
505 aa  432  1e-120  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.974367  normal  0.0527316 
 
 
-
 
NC_010501  PputW619_0354  signal recognition particle-docking protein FtsY  68.09 
 
 
514 aa  430  1e-119  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3746  signal recognition particle-docking protein FtsY  68.21 
 
 
405 aa  429  1e-119  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007984  BCI_0056  signal recognition particle-docking protein FtsY  62.34 
 
 
354 aa  429  1e-119  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.377347  n/a   
 
 
-
 
NC_004578  PSPTO_0427  signal recognition particle-docking protein FtsY  68.09 
 
 
513 aa  428  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0934  signal recognition particle-docking protein FtsY  63.82 
 
 
478 aa  416  9.999999999999999e-116  Psychrobacter arcticus 273-4  Bacteria  decreased coverage  0.000000000272201  normal 
 
 
-
 
NC_009654  Mmwyl1_4328  signal recognition particle-docking protein FtsY  61.52 
 
 
413 aa  413  1e-114  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1934  cell division transporter substrate-binding protein FtsY  65.25 
 
 
362 aa  415  1e-114  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.249425  n/a   
 
 
-
 
NC_007969  Pcryo_1481  signal recognition particle-docking protein FtsY  63.49 
 
 
477 aa  412  1e-114  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0171168  normal 
 
 
-
 
NC_009524  PsycPRwf_1001  signal recognition particle-docking protein FtsY  57.51 
 
 
397 aa  412  1e-113  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00000041577  hitchhiker  0.00000536863 
 
 
-
 
NC_007912  Sde_3597  signal recognition particle-docking protein FtsY  60.92 
 
 
375 aa  412  1e-113  Saccharophagus degradans 2-40  Bacteria  normal  0.549182  normal  0.0916898 
 
 
-
 
NC_007520  Tcr_1942  signal recognition particle-docking protein FtsY  57.49 
 
 
373 aa  407  1.0000000000000001e-112  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_48100  signal recognition particle-docking protein FtsY  62.24 
 
 
451 aa  405  1e-111  Azotobacter vinelandii DJ  Bacteria  normal  0.0287334  n/a   
 
 
-
 
NC_007492  Pfl01_5337  signal recognition particle-docking protein FtsY  66.13 
 
 
515 aa  396  1e-109  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.760188 
 
 
-
 
NC_008463  PA14_04900  signal recognition particle receptor FtsY  64.63 
 
 
451 aa  395  1e-109  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.653255  normal 
 
 
-
 
NC_009439  Pmen_4175  signal recognition particle-docking protein FtsY  67.11 
 
 
475 aa  394  1e-108  Pseudomonas mendocina ymp  Bacteria  normal  0.0143973  normal 
 
 
-
 
NC_009656  PSPA7_0468  signal recognition particle receptor FtsY  65.23 
 
 
447 aa  391  1e-107  Pseudomonas aeruginosa PA7  Bacteria  normal  0.680128  n/a   
 
 
-
 
NC_006368  lpp2724  hypothetical protein  62.23 
 
 
355 aa  388  1e-106  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2597  hypothetical protein  61.92 
 
 
355 aa  387  1e-106  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2988  signal recognition particle-docking protein FtsY  58.07 
 
 
329 aa  372  1e-101  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.289168  n/a   
 
 
-
 
NC_002977  MCA0133  cytochrome oxidase assembly family protein/cell division protein FtsY  59.34 
 
 
671 aa  360  3e-98  Methylococcus capsulatus str. Bath  Bacteria  normal  0.167728  n/a   
 
 
-
 
NC_008340  Mlg_2659  signal recognition particle-docking protein FtsY  60.26 
 
 
389 aa  358  9.999999999999999e-98  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.319125  hitchhiker  0.000261917 
 
 
-
 
NC_009727  CBUD_0216  cell division protein  57.63 
 
 
324 aa  356  5.999999999999999e-97  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.345429  n/a   
 
 
-
 
NC_007517  Gmet_1176  signal recognition particle-docking protein FtsY  54.65 
 
 
351 aa  356  6.999999999999999e-97  Geobacter metallireducens GS-15  Bacteria  normal  0.216853  normal  0.740052 
 
 
-
 
NC_010117  COXBURSA331_A2108  signal recognition particle-docking protein FtsY  57.63 
 
 
324 aa  355  8.999999999999999e-97  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0170  signal recognition particle-docking protein FtsY  55.87 
 
 
347 aa  354  2e-96  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.200798  normal 
 
 
-
 
NC_013422  Hneap_1544  signal recognition particle-docking protein FtsY  52.72 
 
 
391 aa  348  1e-94  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1181  signal recognition particle-docking protein FtsY  52.41 
 
 
506 aa  346  6e-94  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0879214  n/a   
 
 
-
 
NC_008554  Sfum_2460  signal recognition particle-docking protein FtsY  53.62 
 
 
326 aa  339  8e-92  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01431  signal recognition particle-docking protein FtsY  53.97 
 
 
311 aa  338  9.999999999999999e-92  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.15526  n/a   
 
 
-
 
NC_009483  Gura_1096  signal recognition particle-docking protein FtsY  55.24 
 
 
340 aa  337  2.9999999999999997e-91  Geobacter uraniireducens Rf4  Bacteria  normal  0.0138862  n/a   
 
 
-
 
NC_007947  Mfla_0733  signal recognition particle-docking protein FtsY  53.54 
 
 
335 aa  336  5.999999999999999e-91  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1132  cell division protein FtsY  54.84 
 
 
350 aa  336  7.999999999999999e-91  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2738  signal recognition particle-docking protein FtsY  52.7 
 
 
328 aa  334  3e-90  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3496  signal recognition particle-docking protein FtsY  52.76 
 
 
342 aa  333  7.000000000000001e-90  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00000989715  n/a   
 
 
-
 
NC_009720  Xaut_0413  signal recognition particle-docking protein FtsY  46.91 
 
 
529 aa  332  1e-89  Xanthobacter autotrophicus Py2  Bacteria  normal  0.571496  normal  0.495384 
 
 
-
 
NC_011894  Mnod_4411  signal recognition particle-docking protein FtsY  52.77 
 
 
437 aa  330  4e-89  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0376  signal recognition particle-docking protein FtsY  53.62 
 
 
376 aa  329  7e-89  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.207178  decreased coverage  0.0031492 
 
 
-
 
NC_010511  M446_3410  signal recognition particle-docking protein FtsY  52.12 
 
 
473 aa  329  1.0000000000000001e-88  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.457129 
 
 
-
 
NC_011206  Lferr_2373  signal recognition particle-docking protein FtsY  55.09 
 
 
343 aa  329  1.0000000000000001e-88  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.119612  hitchhiker  0.000783963 
 
 
-
 
NC_009667  Oant_0925  signal recognition particle-docking protein FtsY  51.11 
 
 
494 aa  327  3e-88  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.248728  n/a   
 
 
-
 
NC_011761  AFE_2753  signal recognition particle-docking protein FtsY  56.83 
 
 
316 aa  327  3e-88  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0361  signal recognition particle-docking protein FtsY  43.62 
 
 
408 aa  325  2e-87  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3616  signal recognition particle-docking protein FtsY  56.91 
 
 
461 aa  323  5e-87  Thauera sp. MZ1T  Bacteria  normal  0.582435  n/a   
 
 
-
 
NC_011666  Msil_3223  signal recognition particle-docking protein FtsY  46.15 
 
 
483 aa  322  9.999999999999999e-87  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.000124674 
 
 
-
 
NC_010172  Mext_2723  signal recognition particle-docking protein FtsY  49.34 
 
 
488 aa  321  1.9999999999999998e-86  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2950  signal recognition particle-docking protein FtsY  49.34 
 
 
488 aa  320  6e-86  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.260236  hitchhiker  0.00455351 
 
 
-
 
NC_008783  BARBAKC583_0017  signal recognition particle-docking protein FtsY  49.2 
 
 
387 aa  319  9e-86  Bartonella bacilliformis KC583  Bacteria  normal  0.278591  n/a   
 
 
-
 
NC_011369  Rleg2_3746  signal recognition particle-docking protein FtsY  50.16 
 
 
528 aa  318  2e-85  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.352146  normal 
 
 
-
 
NC_010725  Mpop_2845  signal recognition particle-docking protein FtsY  49.34 
 
 
493 aa  318  2e-85  Methylobacterium populi BJ001  Bacteria  normal  normal  0.634202 
 
 
-
 
NC_010577  XfasM23_0936  signal recognition particle-docking protein FtsY  50.97 
 
 
397 aa  317  5e-85  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>