15 homologs were found in PanDaTox collection
for query gene Shewmr4_1136 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_1136  hypothetical protein  100 
 
 
125 aa  244  2e-64  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000147263  normal 
 
 
-
 
NC_008322  Shewmr7_1207  hypothetical protein  98.4 
 
 
125 aa  241  3e-63  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000945215  normal 
 
 
-
 
NC_008577  Shewana3_1137  hypothetical protein  97.6 
 
 
125 aa  239  7.999999999999999e-63  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000000411653  normal 
 
 
-
 
NC_004347  SO_3418  hypothetical protein  72.8 
 
 
125 aa  186  1e-46  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_1225  hypothetical protein  69.92 
 
 
123 aa  180  5.0000000000000004e-45  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000155857  n/a   
 
 
-
 
NC_011663  Sbal223_3088  hypothetical protein  69.92 
 
 
123 aa  180  5.0000000000000004e-45  Shewanella baltica OS223  Bacteria  hitchhiker  0.00000343342  hitchhiker  0.00665202 
 
 
-
 
NC_009665  Shew185_1269  hypothetical protein  69.92 
 
 
123 aa  177  2.9999999999999997e-44  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000458389  n/a   
 
 
-
 
NC_009997  Sbal195_1302  hypothetical protein  69.11 
 
 
123 aa  177  2.9999999999999997e-44  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000316853  normal 
 
 
-
 
NC_008345  Sfri_2908  hypothetical protein  55 
 
 
125 aa  134  4e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.553856  n/a   
 
 
-
 
NC_009831  Ssed_1173  hypothetical protein  49.58 
 
 
128 aa  129  1.0000000000000001e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2742  hypothetical protein  48.36 
 
 
124 aa  127  7.000000000000001e-29  Shewanella denitrificans OS217  Bacteria  normal  0.448875  n/a   
 
 
-
 
NC_010506  Swoo_1268  hypothetical protein  47.54 
 
 
126 aa  119  1.9999999999999998e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00365613 
 
 
-
 
NC_009901  Spea_1064  hypothetical protein  47.86 
 
 
134 aa  104  5e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1077  hypothetical protein  40.16 
 
 
143 aa  96.7  9e-20  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000000135433  normal 
 
 
-
 
NC_008700  Sama_0903  hypothetical protein  40.8 
 
 
125 aa  93.6  8e-19  Shewanella amazonensis SB2B  Bacteria  normal  0.595758  normal  0.717815 
 
 
-
 
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