13 homologs were found in PanDaTox collection
for query gene Shewmr4_0149 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_0149  hypothetical protein  100 
 
 
579 aa  1198    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0144  hypothetical protein  96.35 
 
 
577 aa  1051    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0144  hypothetical protein  95.65 
 
 
577 aa  1053    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0737  hypothetical protein  35.2 
 
 
625 aa  343  4e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3624  hypothetical protein  35.11 
 
 
601 aa  337  2.9999999999999997e-91  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0601  hypothetical protein  32.3 
 
 
605 aa  297  4e-79  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.214071  n/a   
 
 
-
 
NC_008700  Sama_0717  hypothetical protein  31.56 
 
 
588 aa  287  5e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.877737 
 
 
-
 
NC_008700  Sama_0272  hypothetical protein  44.71 
 
 
783 aa  57.4  0.0000008  Shewanella amazonensis SB2B  Bacteria  normal  0.654602  normal 
 
 
-
 
NC_010002  Daci_2335  hypothetical protein  31.54 
 
 
554 aa  52.8  0.00002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.755849 
 
 
-
 
NC_008738  Maqu_4328  hypothetical protein  35.63 
 
 
491 aa  49.7  0.0002  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_4620  hypothetical protein  44.68 
 
 
545 aa  47.4  0.0008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4576  hypothetical protein  34.88 
 
 
956 aa  46.6  0.001  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.0000000693966 
 
 
-
 
NC_008709  Ping_0410  peptidase domain-containing protein  30.93 
 
 
772 aa  45.4  0.003  Psychromonas ingrahamii 37  Bacteria  normal  0.0975443  normal  0.740662 
 
 
-
 
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