16 homologs were found in PanDaTox collection
for query gene Shewana3_4379 on replicon NC_008573
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4379  hypothetical protein  100 
 
 
301 aa  632  1e-180  Shewanella sp. ANA-3  Bacteria  normal  normal  0.242099 
 
 
-
 
NC_009438  Sputcn32_0235  hypothetical protein  97.34 
 
 
301 aa  595  1e-169  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2859  hypothetical protein  31.27 
 
 
317 aa  129  9.000000000000001e-29  Shewanella sp. MR-7  Bacteria  normal  normal  0.540816 
 
 
-
 
NC_011138  MADE_01487  hypothetical protein  32.87 
 
 
355 aa  116  5e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.61135  n/a   
 
 
-
 
NC_009783  VIBHAR_01110  hypothetical protein  26.89 
 
 
362 aa  111  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_1300  hypothetical protein  30.14 
 
 
426 aa  65.1  0.000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.061722  n/a   
 
 
-
 
NC_010172  Mext_0085  hypothetical protein  33.33 
 
 
387 aa  59.3  0.00000008  Methylobacterium extorquens PA1  Bacteria  normal  0.56108  normal 
 
 
-
 
NC_010172  Mext_0167  hypothetical protein  31.52 
 
 
387 aa  58.5  0.0000001  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0013  hypothetical protein  32.14 
 
 
257 aa  53.9  0.000003  Thauera sp. MZ1T  Bacteria  normal  0.652792  n/a   
 
 
-
 
NC_010511  M446_5541  hypothetical protein  23.3 
 
 
378 aa  51.6  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0078  hypothetical protein  31.91 
 
 
399 aa  50.8  0.00003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.698048  normal 
 
 
-
 
NC_007969  Pcryo_1614  hypothetical protein  29.76 
 
 
298 aa  45.1  0.002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0225237 
 
 
-
 
NC_008738  Maqu_4319  hypothetical protein  31.18 
 
 
584 aa  43.5  0.004  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_007410  Ava_B0210  hypothetical protein  37.25 
 
 
310 aa  43.1  0.006  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_009705  YpsIP31758_B0076  hypothetical protein  38.98 
 
 
514 aa  42.7  0.007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008573  Shewana3_4169  hypothetical protein  38.46 
 
 
382 aa  42.7  0.008  Shewanella sp. ANA-3  Bacteria  normal  normal  0.0380533 
 
 
-
 
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