29 homologs were found in PanDaTox collection
for query gene Shewana3_2342 on replicon NC_008577
Organism: Shewanella sp. ANA-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008577  Shewana3_2342  arsenical resistance operon trans-acting repressor ArsD  100 
 
 		 120 aa  248  1e-65  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.0000070879  normal  0.0224625 
 
 
-
 
NC_009438  Sputcn32_3827  arsenical resistance operon trans-acting repressor ArsD  99.17 
 
 		 120 aa  248  3e-65  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00245135  n/a   
 
 
-
 
NC_007298  Daro_2638  arsenical resistance operon trans-acting repressor ArsD  66.94 
 
 		 121 aa  165  2e-40  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0651  Arsenical resistance operon trans-acting repressor ArsD  60 
 
 		 119 aa  150  4e-36  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.0660969 
 
 
-
 
NC_011992  Dtpsy_2140  Arsenical resistance operon trans-acting repressor ArsD  58.2 
 
 		 122 aa  150  5e-36  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B2122  arsenical resistance operon trans-acting repressor ArsD  56.67 
 
 		 120 aa  150  7e-36  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00182462  n/a   
 
 
-
 
NC_011080  SNSL254_A2188  arsenical resistance operon trans-acting repressor ArsD  55.83 
 
 		 120 aa  148  3e-35  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1492  arsenical resistance operon trans-acting repressor ArsD  56.56 
 
 		 122 aa  145  2.0000000000000003e-34  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  0.435041 
 
 
-
 
NC_007908  Rfer_3665  arsenical resistance operon trans-acting repressor ArsD  53.12 
 
 		 127 aa  142  2e-33  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2711  arsenical resistance operon trans-acting repressor ArsD  51.2 
 
 		 125 aa  134  5e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_01494  hypothetical protein  49.59 
 
 		 120 aa  132  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_0147  Arsenical resistance operon trans-acting repressor ArsD  54.46 
 
 		 114 aa  124  3e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.346346  n/a   
 
 
-
 
NC_007643  Rru_A1448  arsenical resistance operon trans-acting repressor ArsD  45.83 
 
 		 180 aa  122  1e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.579922  n/a   
 
 
-
 
NC_009338  Mflv_1655  arsenical resistance operon trans-acting repressor ArsD  45.16 
 
 		 117 aa  116  9.999999999999999e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0345757  normal  1 
 
 
-
 
NC_008726  Mvan_5095  arsenite-activated ATPase ArsA  44.09 
 
 		 729 aa  116  9.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010087  Bmul_5669  arsenical resistance operon trans-acting repressor ArsD  47.15 
 
 		 122 aa  112  1.0000000000000001e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.08521  normal  1 
 
 
-
 
NC_008346  Swol_0937  arsenical resistance operon trans-acting repressor  40.5 
 
 		 120 aa  105  3e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2725  Arsenical resistance operon trans-acting repressor ArsD  43.4 
 
 		 112 aa  99  2e-20  Thauera sp. MZ1T  Bacteria  normal  0.0247771  n/a   
 
 
-
 
NC_010681  Bphyt_3704  Arsenical resistance operon trans-acting repressor ArsD  39.5 
 
 		 121 aa  98.2  4e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.687919  hitchhiker  0.00143674 
 
 
-
 
NC_011769  DvMF_2391  Arsenical resistance operon trans-acting repressor ArsD  45.36 
 
 		 107 aa  97.8  4e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_011830  Dhaf_1190  Arsenical resistance operon trans-acting repressor ArsD  38.24 
 
 		 129 aa  97.8  4e-20  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000189369  n/a   
 
 
-
 
NC_005707  BCE_A0157  arsenical resistence operon repressor ArsD  40.78 
 
 		 119 aa  93.6  9e-19  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011777  BCAH820_B0305  arsenical resistence operon repressor ArsD  40.78 
 
 		 119 aa  93.6  9e-19  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_010001  Cphy_2154  arsenical resistance operon trans-acting repressor ArsD  37 
 
 		 127 aa  87.8  5e-17  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP2427  arsenical resistance operon trans-acting repressor  37.63 
 
 		 115 aa  84.3  5e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  0.493581  n/a   
 
 
-
 
NC_013171  Apre_0353  Arsenical resistance operon trans-acting repressor ArsD  32.69 
 
 		 123 aa  82  0.000000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1382  arsenical resistance operon trans-acting repressor ArsD  33.61 
 
 		 123 aa  75.5  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012030  Hlac_3444  Arsenical resistance operon trans-acting repressor ArsD  31.13 
 
 		 109 aa  65.1  0.0000000003  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013201  Hmuk_3343  Arsenical resistance operon trans-acting repressor ArsD  30.63 
 
 		 109 aa  62  0.000000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.884553  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>