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3 homologs were found in PanDaTox collection
for query gene
Shew_3831
on replicon NC_009092
Organism:
Shewanella loihica PV-4
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092
Shew_3831
100
120 bp
238
3e-61
Shewanella loihica PV-4
Bacteria
normal
1
hitchhiker
0.000769405
-
NC_009438
Sputcn32_2926
95
956 bp
190
5e-47
Shewanella putrefaciens CN-32
Bacteria
normal
0.937376
n/a
-
NC_009092
Shew_1415
89.17
920 bp
135
3e-30
Shewanella loihica PV-4
Bacteria
normal
1
decreased coverage
0.00216347
-
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