4 homologs were found in PanDaTox collection
for query gene Shew_3414 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_3414  hypothetical protein  100 
 
 
1000 aa  2038    Shewanella loihica PV-4  Bacteria  normal  normal  0.789189 
 
 
-
 
NC_009831  Ssed_0442  hypothetical protein  45.05 
 
 
1000 aa  879    Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.129747 
 
 
-
 
NC_013456  VEA_004015  D-Tyr-tRNAtyr deacylase  25.76 
 
 
1013 aa  148  5e-34  Vibrio sp. Ex25  Bacteria  normal  0.28935  n/a   
 
 
-
 
NC_008255  CHU_1335  endoglucanase-like protein  22.46 
 
 
2042 aa  60.5  0.0000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0110821 
 
 
-
 
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