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6 homologs were found in PanDaTox collection
for query gene
Shew_1415
on replicon NC_009092
Organism:
Shewanella loihica PV-4
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092
Shew_1415
100
920 bp
1824
Shewanella loihica PV-4
Bacteria
normal
1
decreased coverage
0.00216347
-
NC_009438
Sputcn32_2926
86.92
956 bp
797
Shewanella putrefaciens CN-32
Bacteria
normal
0.937376
n/a
-
NC_009092
Shew_3831
89.17
120 bp
135
2.0000000000000002e-29
Shewanella loihica PV-4
Bacteria
normal
1
hitchhiker
0.000769405
-
NC_009665
Shew185_1624
83.7
948 bp
63.9
0.00000008
Shewanella baltica OS185
Bacteria
normal
0.0182667
n/a
-
NC_011663
Sbal223_2719
90.7
619 bp
54
0.00007
Shewanella baltica OS223
Bacteria
hitchhiker
0.0000884127
hitchhiker
0.0000000711999
-
NC_009438
Sputcn32_0294
96.43
304 bp
48.1
0.005
Shewanella putrefaciens CN-32
Bacteria
normal
1
n/a
-
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