21 homologs were found in PanDaTox collection
for query gene Shew185_4438 on replicon NC_009661
Organism: Shewanella baltica OS185



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009661  Shew185_4438  Type-F conjugative transfer system pilin assembly protein TrbC  100 
 
 
245 aa  501  1e-141  Shewanella baltica OS185  Bacteria  normal  normal 
 
 
-
 
NC_011664  Sbal223_4382  type-F conjugative transfer system pilin assembly protein TrbC  94.72 
 
 
246 aa  471  1e-132  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009998  Sbal195_4531  type-F conjugative transfer system pilin assembly protein TrbC  95.12 
 
 
246 aa  473  1e-132  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011668  Sbal223_4434  type-F conjugative transfer system pilin assembly protein TrbC  95.12 
 
 
246 aa  457  9.999999999999999e-129  Shewanella baltica OS223  Bacteria  normal  0.341224  normal 
 
 
-
 
NC_009999  Sbal195_4623  type-F conjugative transfer system pilin assembly protein TrbC  95.12 
 
 
246 aa  457  9.999999999999999e-129  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011665  Sbal223_4506  type-F conjugative transfer system pilin assembly protein TrbC  96.73 
 
 
245 aa  455  1e-127  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011311  VSAL_p840_12  hypothetical protein, putative conjugative transfer protein TrbC  47.94 
 
 
255 aa  170  2e-41  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_006365  plpp0032  hypothetical protein  31.1 
 
 
220 aa  85.1  9e-16  Legionella pneumophila str. Paris  Bacteria  normal  0.451875  n/a   
 
 
-
 
NC_008782  Ajs_1529  hypothetical protein  36.67 
 
 
250 aa  69.3  0.00000000005  Acidovorax sp. JS42  Bacteria  normal  normal  0.905367 
 
 
-
 
NC_007298  Daro_2659  hypothetical protein  37.07 
 
 
252 aa  68.2  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.0664159  normal 
 
 
-
 
NC_009425  Ent638_4297  hypothetical protein  27.31 
 
 
206 aa  65.9  0.0000000005  Enterobacter sp. 638  Bacteria  normal  normal  0.654961 
 
 
-
 
NC_007298  Daro_2326  hypothetical protein  36.21 
 
 
252 aa  63.2  0.000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.0830351  normal 
 
 
-
 
NC_010488  EcSMS35_A0023  conjugal transfer pilus assembly protein TrbC  30 
 
 
212 aa  58.9  0.00000007  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_006366  plpl0024  hypothetical protein  30.07 
 
 
159 aa  55.8  0.0000006  Legionella pneumophila str. Lens  Bacteria  normal  0.43929  n/a   
 
 
-
 
NC_007490  RSP_4232  TrbC, sex pilus assembly and mating pair formation protein  28.57 
 
 
250 aa  52  0.000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3999  hypothetical protein  31.62 
 
 
254 aa  50.8  0.00002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009507  Swit_5378  Type-F conjugative transfer system pilin assembly protein TrbC  28.17 
 
 
247 aa  47.8  0.0002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.890308 
 
 
-
 
NC_008765  Ajs_4173  hypothetical protein  24.59 
 
 
258 aa  47  0.0003  Acidovorax sp. JS42  Bacteria  normal  normal  0.0999993 
 
 
-
 
NC_008545  Bcen2424_6807  hypothetical protein  33.33 
 
 
262 aa  47  0.0003  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008826  Mpe_B0350  sex pilus assembly and mating pair formation protein  29.6 
 
 
228 aa  46.2  0.0005  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.448166 
 
 
-
 
NC_007971  Rmet_6166  type-F conjugative transfer system pilin assembly protein TrbC  27.78 
 
 
205 aa  45.1  0.001  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00855701  normal 
 
 
-
 
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