More than 300 homologs were found in PanDaTox collection
for query gene Shew185_2284 on replicon NC_009665
Organism: Shewanella baltica OS185



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_2284  radical SAM domain-containing protein  100 
 
 
298 aa  619  1e-176  Shewanella baltica OS185  Bacteria  hitchhiker  0.00260507  n/a   
 
 
-
 
NC_011663  Sbal223_2061  Radical SAM domain protein  94.63 
 
 
298 aa  590  1e-168  Shewanella baltica OS223  Bacteria  normal  unclonable  0.00000000000288905 
 
 
-
 
NC_009052  Sbal_2065  radical SAM domain-containing protein  94.33 
 
 
300 aa  587  1e-167  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2401  radical SAM domain-containing protein  93.62 
 
 
298 aa  586  1e-166  Shewanella baltica OS195  Bacteria  normal  0.312992  unclonable  0.00000836266 
 
 
-
 
NC_004347  SO_2408  radical activating enzyme  86.71 
 
 
286 aa  525  1e-148  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1984  radical SAM domain-containing protein  65.62 
 
 
320 aa  447  1e-125  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.450438  n/a   
 
 
-
 
NC_009831  Ssed_0267  putative pyruvate formate lyase activating enzyme  62.42 
 
 
298 aa  413  1e-114  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0149457 
 
 
-
 
NC_010506  Swoo_0270  radical SAM domain-containing protein  60.96 
 
 
292 aa  405  1.0000000000000001e-112  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000473608 
 
 
-
 
NC_009901  Spea_3944  radical SAM domain-containing protein  61.3 
 
 
292 aa  405  1.0000000000000001e-112  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003579  radical activating enzyme  55.83 
 
 
293 aa  352  5e-96  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II1084  putative 4Fe-4S ferredoxin, iron-sulfur binding  50.84 
 
 
303 aa  334  9e-91  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4927  radical SAM domain-containing protein  53.1 
 
 
287 aa  323  3e-87  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4614  radical SAM domain-containing protein  52.76 
 
 
287 aa  318  7.999999999999999e-86  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4977  radical SAM domain-containing protein  52.41 
 
 
287 aa  318  7.999999999999999e-86  Escherichia coli E24377A  Bacteria  normal  0.258865  n/a   
 
 
-
 
NC_011149  SeAg_B4886  pyruvate formate lyase activating enzyme  52.07 
 
 
287 aa  318  9e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0614153  n/a   
 
 
-
 
CP001509  ECD_04255  predicted pyruvate formate lyase activating enzyme  52.41 
 
 
287 aa  318  1e-85  Escherichia coli BL21(DE3)  Bacteria  normal  0.542782  n/a   
 
 
-
 
CP001637  EcDH1_3619  Radical SAM domain protein  52.41 
 
 
287 aa  318  1e-85  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4923  radical SAM domain protein  52.07 
 
 
287 aa  317  1e-85  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04221  hypothetical protein  52.41 
 
 
287 aa  318  1e-85  Escherichia coli BL21  Bacteria  normal  0.606707  n/a   
 
 
-
 
NC_011083  SeHA_C4973  pyruvate formate lyase activating enzyme  52.07 
 
 
287 aa  317  2e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  normal 
 
 
-
 
NC_011080  SNSL254_A4921  pyruvate formate lyase activating enzyme  51.72 
 
 
287 aa  316  2e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4980  pyruvate formate lyase activating enzyme  51.72 
 
 
287 aa  317  2e-85  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.902486  normal 
 
 
-
 
NC_010468  EcolC_3677  radical SAM domain-containing protein  52.41 
 
 
287 aa  316  3e-85  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.005025 
 
 
-
 
NC_011094  SeSA_A4819  pyruvate formate lyase activating enzyme  51.03 
 
 
287 aa  314  9e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.387597  normal 
 
 
-
 
NC_011353  ECH74115_5892  radical SAM domain protein  51.72 
 
 
287 aa  313  2.9999999999999996e-84  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0539  radical SAM domain-containing protein  50.69 
 
 
286 aa  308  1.0000000000000001e-82  Enterobacter sp. 638  Bacteria  normal  0.536382  normal  0.0504206 
 
 
-
 
NC_009783  VIBHAR_02539  hypothetical protein  48.12 
 
 
236 aa  258  6e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_1777  (Formate-C-acetyltransferase)-activating enzyme  37.54 
 
 
279 aa  199  3e-50  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.000000000493175  n/a   
 
 
-
 
NC_013203  Apar_0135  (Formate-C-acetyltransferase)-activating enzyme  35.71 
 
 
294 aa  191  1e-47  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.957254 
 
 
-
 
NC_009012  Cthe_1578  radical SAM family protein  36.93 
 
 
280 aa  185  7e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0637  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  35.83 
 
 
273 aa  182  5.0000000000000004e-45  Clostridium perfringens SM101  Bacteria  normal  0.581706  n/a   
 
 
-
 
NC_008261  CPF_0641  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  35.43 
 
 
273 aa  179  5.999999999999999e-44  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1874  radical SAM domain-containing protein  31.67 
 
 
241 aa  148  9e-35  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3258  glycyl-radical enzyme activating protein family  26.3 
 
 
303 aa  117  3e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.807185  n/a   
 
 
-
 
NC_010718  Nther_2477  glycyl-radical enzyme activating protein family  26.05 
 
 
310 aa  105  1e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.731109  normal 
 
 
-
 
NC_009438  Sputcn32_0207  glycyl-radical activating family protein  30.3 
 
 
306 aa  104  2e-21  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2192  glycyl-radical activating family protein  31.15 
 
 
307 aa  103  3e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2365  glycyl-radical enzyme activating protein family  31.14 
 
 
306 aa  103  3e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.00000514278  n/a   
 
 
-
 
NC_009253  Dred_2966  glycyl-radical activating family protein  27.76 
 
 
297 aa  103  4e-21  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2500  glycyl-radical enzyme activating protein family  30.89 
 
 
294 aa  103  4e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0980  glycyl-radical activating family protein  27.33 
 
 
297 aa  103  5e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.131362 
 
 
-
 
NC_007519  Dde_3054  radical-activating enzyme  29.5 
 
 
302 aa  101  1e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.969131  n/a   
 
 
-
 
NC_013421  Pecwa_4091  glycyl-radical enzyme activating protein family  30.26 
 
 
305 aa  99.4  7e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2102  pyruvate formate-lyase-activating enzyme, putative  27.21 
 
 
298 aa  99  8e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.510382  n/a   
 
 
-
 
NC_011899  Hore_23160  pyruvate formate-lyase activating enzyme  30.25 
 
 
247 aa  99  8e-20  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1396  glycerol dehydratase activating enzyme  25 
 
 
322 aa  99  9e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.214688  n/a   
 
 
-
 
NC_007925  RPC_1176  glycyl-radical activating protein  27.8 
 
 
306 aa  97.8  2e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_0168  glycyl-radical enzyme activating protein family  27.09 
 
 
303 aa  97.1  3e-19  Aciduliprofundum boonei T469  Archaea  normal  0.465492  n/a   
 
 
-
 
NC_013517  Sterm_3704  glycyl-radical enzyme activating protein family  27.15 
 
 
304 aa  96.3  6e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0916  pyruvate-formate lyase-activating enzyme  26.71 
 
 
306 aa  95.1  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0858803  n/a   
 
 
-
 
NC_013165  Shel_17450  glycyl-radical enzyme activator family protein  26.94 
 
 
311 aa  94.4  2e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.478583  normal 
 
 
-
 
NC_013421  Pecwa_3715  glycyl-radical enzyme activating protein family  26.05 
 
 
316 aa  94  3e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2820  pyruvate formate-lyase activating enzyme  29.15 
 
 
250 aa  94  3e-18  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000000272816  n/a   
 
 
-
 
NC_009253  Dred_2752  glycyl-radical activating family protein  26.05 
 
 
310 aa  93.2  4e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1272  radical-activating enzyme  28.24 
 
 
309 aa  93.2  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0367  glycyl-radical enzyme activating protein family  25.08 
 
 
310 aa  93.6  4e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1605  pyruvate-formate lyase activating enzyme  27.2 
 
 
266 aa  92.8  7e-18  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1542  pyruvate formate-lyase activating enzyme  27.21 
 
 
259 aa  90.9  2e-17  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.00863407  normal 
 
 
-
 
NC_009012  Cthe_0506  pyruvate formate-lyase activating enzyme  25.59 
 
 
238 aa  90.9  3e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0339577  n/a   
 
 
-
 
NC_008527  LACR_1999  pyruvate-formate lyase activating enzyme  26.8 
 
 
263 aa  89.7  5e-17  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.637211  n/a   
 
 
-
 
NC_013517  Sterm_1073  glycyl-radical enzyme activating protein family  26.91 
 
 
298 aa  89  8e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.949815  n/a   
 
 
-
 
NC_013522  Taci_1438  glycyl-radical enzyme activating protein family  26.74 
 
 
301 aa  88.6  1e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3391  pyruvate formate-lyase activating enzyme  26.51 
 
 
249 aa  86.3  6e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0513  pyruvate formate-lyase-activating enzyme  27.71 
 
 
243 aa  84.7  0.000000000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1247  glycyl-radical enzyme activating protein family  23.72 
 
 
299 aa  84.7  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1435  glycyl-radical enzyme activating protein family  27.84 
 
 
312 aa  84.3  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1722  pyruvate formate-lyase activating enzyme  24.9 
 
 
293 aa  84.7  0.000000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.461343  normal  0.162758 
 
 
-
 
NC_013421  Pecwa_1996  pyruvate formate lyase-activating enzyme 1  26.64 
 
 
246 aa  84  0.000000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1728  pyruvate formate lyase-activating enzyme 1  26.64 
 
 
246 aa  84  0.000000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.548183  n/a   
 
 
-
 
NC_013456  VEA_003978  pyruvate formate-lyase activating enzyme  27.46 
 
 
246 aa  83.6  0.000000000000004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4810  pyruvate formate-lyase-activating enzyme  27.31 
 
 
243 aa  83.6  0.000000000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0564  pyruvate formate-lyase-activating enzyme  27.71 
 
 
243 aa  83.2  0.000000000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0566  pyruvate formate-lyase-activating enzyme  27.71 
 
 
243 aa  83.2  0.000000000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0425  formate acetyltransferase activating enzyme (pyruvate formate-lyase activating enzyme)  27.31 
 
 
243 aa  82.8  0.000000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1034  pyruvate formate lyase-activating enzyme 1  25.38 
 
 
265 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.633483  normal  0.712061 
 
 
-
 
NC_011083  SeHA_C1068  pyruvate formate lyase-activating enzyme 1  25.38 
 
 
265 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.763935 
 
 
-
 
NC_006274  BCZK0421  formate acetyltransferase activating enzyme (pyruvate formate-lyase activating enzyme)  27.31 
 
 
243 aa  82.4  0.000000000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_16340  pyruvate formate-lyase 1-activating enzyme  25.42 
 
 
287 aa  82.8  0.000000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.243728  normal 
 
 
-
 
NC_013093  Amir_2417  pyruvate formate-lyase activating enzyme  27.5 
 
 
281 aa  82.8  0.000000000000007  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000163232  n/a   
 
 
-
 
NC_011094  SeSA_A1083  pyruvate formate lyase-activating enzyme 1  25.38 
 
 
265 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.704189  normal 
 
 
-
 
NC_011080  SNSL254_A1003  pyruvate formate lyase-activating enzyme 1  25.38 
 
 
265 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0975  pyruvate formate lyase-activating enzyme 1  25.38 
 
 
265 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.462536  n/a   
 
 
-
 
NC_005945  BAS0482  pyruvate formate-lyase-activating enzyme  26.91 
 
 
243 aa  82.4  0.000000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0510  pyruvate formate-lyase-activating enzyme  26.91 
 
 
243 aa  82.4  0.000000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0491  pyruvate formate-lyase-activating enzyme  26.91 
 
 
243 aa  82.4  0.000000000000008  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011898  Ccel_2581  pyruvate formate-lyase activating enzyme  25.45 
 
 
240 aa  82.4  0.000000000000008  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0490  glycyl-radical activating family protein  28.24 
 
 
307 aa  82.4  0.000000000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.164514 
 
 
-
 
NC_009457  VC0395_A1460  pyruvate formate lyase-activating enzyme 1  26.91 
 
 
246 aa  82  0.00000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3308  pyruvate formate lyase-activating enzyme 1  27.05 
 
 
246 aa  82  0.00000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.760643  normal 
 
 
-
 
NC_007498  Pcar_0943  pyruvate-formate lyase-activating enzyme  27.02 
 
 
318 aa  81.3  0.00000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0115559  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0427  pyruvate formate-lyase activating enzyme  27.71 
 
 
243 aa  81.3  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1049  pyruvate formate lyase activating enzyme  25.31 
 
 
246 aa  80.5  0.00000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0432  pyruvate formate-lyase activating enzyme  26.38 
 
 
243 aa  80.5  0.00000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1701  pyruvate formate lyase-activating enzyme 1  26.02 
 
 
246 aa  80.1  0.00000000000004  Serratia proteamaculans 568  Bacteria  normal  normal  0.276107 
 
 
-
 
NC_009253  Dred_3277  glycyl-radical activating family protein  27.09 
 
 
318 aa  80.1  0.00000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2144  glycyl-radical enzyme activating protein family  25.97 
 
 
298 aa  79.3  0.00000000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2097  radical SAM family protein  29.51 
 
 
264 aa  78.6  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2219  pyruvate formate lyase-activating enzyme 1  25.2 
 
 
246 aa  78.2  0.0000000000001  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.542279 
 
 
-
 
NC_012912  Dd1591_2346  pyruvate formate lyase-activating enzyme 1  25.41 
 
 
246 aa  78.6  0.0000000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1418  glycyl-radical activating family protein  24.18 
 
 
315 aa  79  0.0000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
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