25 homologs were found in PanDaTox collection
for query gene Shel_02310 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_02310  Bacterial signal recognition particle RNA  100 
 
 		 97 bp  192  1e-47  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.384516  normal  1 
 
 
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NC_013170  Ccur_01560  bacterial signal recognition particle RNA  95.56 
 
 		 97 bp  147  6e-34  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.916519  hitchhiker  0.00823643 
 
 
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NC_013204  Elen_R0015  SRP RNA; RNA component of signal recognition particle  94.44 
 
 		 109 bp  139  1e-31  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.712093 
 
 
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NC_007298  Daro_R0032  SRP RNA, RNA component of signal recognition particle  96.88 
 
 		 101 bp  56  0.000002  Dechloromonas aromatica RCB  Bacteria  normal  0.116447  unclonable  0.0000000450156 
 
 
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NC_009486  Tpet_R0052  SRP RNA; RNA component of signal recognition particle  94.44 
 
 		 107 bp  56  0.000002  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
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NC_007614  Nmul_AR0033  4.5S ribosomal RNA component of signal recognition particle (SRP)  96.88 
 
 		 104 bp  56  0.000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.898057  n/a   
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  92.11 
 
 		 106 bp  52  0.00003  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_007794  Saro_R0021  SRP RNA; RNA component of signal recognition particle  96.67 
 
 		 92 bp  52  0.00003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.132266  n/a   
 
 
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NC_007947  Mfla_R0040  SRP RNA; RNA component of signal recognition particle  96.67 
 
 		 101 bp  52  0.00003  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000585528  hitchhiker  0.00000253455 
 
 
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NC_010184  BcerKBAB4_R0007  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 105 bp  48.1  0.0004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.221394  n/a   
 
 
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NC_011773  BCAH820_5599  Bacterial signal recognition particle RNA  91.67 
 
 		 103 bp  48.1  0.0004  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
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NC_011772  BCG9842_B5295  Bacterial signal recognition particle RNA  91.67 
 
 		 103 bp  48.1  0.0004  Bacillus cereus G9842  Bacteria  hitchhiker  0.00057478  normal  1 
 
 
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NC_011725  BCB4264_A5622  Bacterial signal recognition particle RNA  91.67 
 
 		 103 bp  48.1  0.0004  Bacillus cereus B4264  Bacteria  hitchhiker  0.00935785  n/a   
 
 
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NC_011658  BCAH187_A0025  Bacterial signal recognition particle RNA  91.67 
 
 		 103 bp  48.1  0.0004  Bacillus cereus AH187  Bacteria  hitchhiker  0.00110095  n/a   
 
 
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NC_010483  TRQ2_R0052  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 105 bp  48.1  0.0004  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
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NC_007005  Psyr_RNA34  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 117 bp  48.1  0.0004  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00314643  normal  1 
 
 
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NC_009674  Bcer98_R0007  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 104 bp  48.1  0.0004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.011849  n/a   
 
 
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NC_009616  Tmel_R0058  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 105 bp  48.1  0.0004  Thermosipho melanesiensis BI429  Bacteria  normal  0.175728  n/a   
 
 
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NC_009718  Fnod_R0032  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 104 bp  46.1  0.002  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.000220464  n/a   
 
 
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NC_009654  Mmwyl1_R0044  SRP RNA; RNA component of signal recognition particle  96.3 
 
 		 117 bp  46.1  0.002  Marinomonas sp. MWYL1  Bacteria  normal  0.577692  normal  0.0469682 
 
 
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NC_012880  Dd703_R0025  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 117 bp  46.1  0.002  Dickeya dadantii Ech703  Bacteria  normal  0.829287  n/a   
 
 
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NC_013739  Cwoe_R0042  SRP RNA; RNA component of signal recognitionparti cle  93.33 
 
 		 91 bp  44.1  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
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NC_011899  Hore_R0085    100 
 
 		 103 bp  44.1  0.006  Halothermothrix orenii H 168  Bacteria  unclonable  1.917e-19  n/a   
 
 
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NC_009943  Dole_R0001  SRP RNA; RNA component of signal recognition particle  91.18 
 
 		 123 bp  44.1  0.006  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.267519  n/a   
 
 
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NC_007644  Moth_R0008  4.5S RNA, SRP RNA  100 
 
 		 103 bp  44.1  0.006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.145743  hitchhiker  0.00000711597 
 
 
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